Evidence map›Paper›PMID 26823625›Full record

ArticlePersoonia2015

Phylogeography and evolutionary patterns in Sporothrix spanning more than 14 000 human and animal case reports.

Y Zhang, F Hagen, B Stielow, A M Rodrigues, K Samerpitak, X Zhou, P Feng, L Yang, M Chen, S Deng and 11 more

Abstract read
In one paragraph

Article in Persoonia, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 116 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
116citing papers in PubMed, 3 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

116 citing papers in PubMed, 3 syntheses or guidelines pooled it.

  1. Systematic review of literature to evaluate global distribution of species of theFrontiers in cellular and infection microbiology · 2024
    Pooled it
  2. The Historical Burden of Sporotrichosis in Brazil: a Systematic Review of Cases Reported from 1907 to 2020.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2022
    Pooled it
  3. Sporotrichosis in Mexico.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2021
    Pooled it
  4. Article
  5. Article
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  7. Chemical modifications of diphenyl diselenide enhance its anti-Sporothrix spp. activity and exhibit synergism with itraconazole.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2026
    Article
  8. Genetic Manipulation inJournal of fungi (Basel, Switzerland) · 2026
    Review
  9. Article
  10. Current Insights intoJournal of fungi (Basel, Switzerland) · 2025
    Article
  11. Cryptic Diversity and Ecological Overlap inJournal of fungi (Basel, Switzerland) · 2025
    Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. A case report of rapid diagnosis ofFrontiers in medicine · 2025
    Article
  18. Article
  19. MycoKeys · 2025
    Article
  20. Review

56 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Y ZhangDepartment of Dermatology, Tianjin Academy of Traditional Chinese Medicine Affiliated Hospital, Tianjin, China;; CBS-KNAW Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD Utrecht, The Netherlands.
F HagenDepartment of Medical Microbiology and Infectious Diseases, Canisius Wilhelmina Hospital, Nijmegen, The Netherlands.
B StielowCBS-KNAW Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD Utrecht, The Netherlands.
A M RodriguesDepartment of Microbiology, Immunology and Parasitology, Cellular Biology Division, Federal University of São Paulo, São Paulo, Brazil.
K SamerpitakCBS-KNAW Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD Utrecht, The Netherlands.; Department of Microbiology, Faculty of Medicine, Khon Kaen University, Khon Kaen, Thailand.
X ZhouDepartment of Dermatology, First Affiliated Hospital of Chongqing Medical University, Chongqing, China.
P FengThird Affiliated Hospital, Sun Yat-sen University, Guangzhou, China.
L YangCBS-KNAW Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD Utrecht, The Netherlands.
M ChenCBS-KNAW Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD Utrecht, The Netherlands.; Shanghai Key Laboratory of Molecular Medical Mycology, Changzheng Hospital, Second Military Medical University, Shanghai, China.
S DengShanghai Key Laboratory of Molecular Medical Mycology, Changzheng Hospital, Second Military Medical University, Shanghai, China.
S LiDepartment of Dermatology and Venereology, First Hospital of Jilin University, Changchun, Jilin, China.
W LiaoShanghai Key Laboratory of Molecular Medical Mycology, Changzheng Hospital, Second Military Medical University, Shanghai, China.
R LiDepartment of Dermatology, Peking University First Hospital, Research Center for Medical Mycology, Beijing, China.
F LiDepartment of Dermatology and Venereology, Second Hospital of Jilin University, Changchun, Jilin, China.
J F MeisDepartment of Medical Microbiology and Infectious Diseases, Canisius Wilhelmina Hospital, Nijmegen, The Netherlands.; Department of Medical Microbiology, Radboud University Medical Center, Nijmegen, The Netherlands.
J GuarroUnitat de Microbiologia, Facultat de Medicina i Ciencies de la Salut, IISPV Universitat Rovira i Virgili, Reus, Tarragona, Spain.
M TeixeiraDepartment of Cell Biology, Biological Sciences Institute, University of Brasília, Brasília, Distrito Federal, Brazil.
H S Al-ZahraniBiological Sciences Department, Faculty of Science, King Abdulaziz University, Jeddah, Saudi Arabia.
Z Pires de CamargoDepartment of Microbiology, Immunology and Parasitology, Cellular Biology Division, Federal University of São Paulo, São Paulo, Brazil.
L ZhangDepartment of Dermatology, Tianjin Academy of Traditional Chinese Medicine Affiliated Hospital, Tianjin, China;
G S de HoogCBS-KNAW Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD Utrecht, The Netherlands.; Third Affiliated Hospital, Sun Yat-sen University, Guangzhou, China.; Department of Dermatology, Peking University First Hospital, Research Center for Medical Mycology, Beijing, China.; Department of Cell Biology, Biological Sciences Institute, University of Brasília, Brasília, Distrito Federal, Brazil.; Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Amsterdam, The Netherlands; Department of Basic Biology, University of Paraná, Curitiba, Brazil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pathology to vertebrate hosts has emerged repeatedly in the order Ophiostomatales. Occasional infections have been observed in Sporothrix mexicana at a low level of virulence, while the main pathogenic species cluster in a derived clade around S. schenckii s.str. In this paper, phylogeny and epidemiology of the members of this clade were investigated for 99 clinical and 36 environmental strains using four genetic loci, viz. rDNA ITS and partial CAL, TEF1, and TEF3; data are compared with amplified fragment length polymorphism (AFLP) genotyping. The four main species of the pathogenic clade were recognised. The species proved to show high degrees of endemicity, which enabled interpretation of literature data where live material or genetic information is lacking. The clade of four species comprised nine subclusters, which often had limited geographic distribution and were separate from each other in all partitions, suggesting low degrees of interbreeding between populations. In contrast, S. globosa exhibited consistent global distribution of identical AFLP types, suggesting another type of dispersal. Sporothrix brasiliensis is known to be involved in an expanding zoonosis and transmitted by cats, whereas S. globosa infections originated from putrid plant material, causing a sapronosis. Sporothrix schenckii s.str., the most variable species within the clade, also had a plant origin, with ecological similarities to that of S. globosa. A hypothesis was put forward that highly specific conditions in the plant material are required to promote the growth of Sporothrix. Fermented, self-heated plant debris may stimulate the thermodependent yeast-like invasive form of the fungus, which facilitates repeated infection of mammals.

Indexed as

epidemiologyhistorical biogeographyphylogenysapronosisSporothrixsporotrichosistransmission routesyeast conversionzoonosis

Identifiers

PMID26823625
PMCPMC4713101

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.