Evidence map›Paper›PMID 26822609›Full record

ArticleScience (New York, N.Y.)2016

2.3 Å resolution cryo-EM structure of human p97 and mechanism of allosteric inhibition.

Soojay Banerjee, Alberto Bartesaghi, Alan Merk, Prashant Rao, Stacie L Bulfer, Yongzhao Yan, Neal Green, Barbara Mroczkowski, R Jeffrey Neitz, Peter Wipf and 6 more

Open access · greenAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 209 papers.

0numbers the graph read from it
0cells of the map it votes in
209citing papers in PubMed
33.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

209 citing papers in PubMed, 355 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Disulfiram metabolite Cu(DDC)EBioMedicine · 2026
    Article
  11. Article
  12. Article
  13. Article
  14. A genome-scale drug discovery pipeline uncovers therapeutic targets and a unique p97 allosteric binding site inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Molecular Tweezers Block the Functional Pore of a Protein Machine.Journal of the American Chemical Society · 2025
    Article
  20. Article

149 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 1 country.

Soojay BanerjeeLaboratory of Cell Biology, National Cancer Institute, Bethesda, MD 20892, USA.
Alberto BartesaghiLaboratory of Cell Biology, National Cancer Institute, Bethesda, MD 20892, USA.
Alan MerkLaboratory of Cell Biology, National Cancer Institute, Bethesda, MD 20892, USA.
Prashant RaoLaboratory of Cell Biology, National Cancer Institute, Bethesda, MD 20892, USA.
Stacie L BulferSmall Molecule Discovery Center, Pharmaceutical Chemistry, School of Pharmacy, University of California, San Francisco, CA 94143, USA.
Yongzhao YanUniversity of Pittsburgh Chemical Diversity Center, University of Pittsburgh, Pittsburgh, PA 15260, USA.
Neal GreenLeidos Biomedical Research Inc., Frederick, MD 21702, USA.
Barbara MroczkowskiDivision of Cancer Treatment and Diagnosis, National Cancer Institute, Bethesda, MD 20892, USA.
R Jeffrey NeitzSmall Molecule Discovery Center, Pharmaceutical Chemistry, School of Pharmacy, University of California, San Francisco, CA 94143, USA.
Peter WipfUniversity of Pittsburgh Chemical Diversity Center, University of Pittsburgh, Pittsburgh, PA 15260, USA.
Veronica FalconieriLaboratory of Cell Biology, National Cancer Institute, Bethesda, MD 20892, USA.
Raymond J DeshaiesDivision of Biology and Biological Engineering and Howard Hughes Medical Institute, California Institute of Technology, Pasadena, CA 91107, USA.
Jacqueline L S MilneLaboratory of Cell Biology, National Cancer Institute, Bethesda, MD 20892, USA.
Donna HurynUniversity of Pittsburgh Chemical Diversity Center, University of Pittsburgh, Pittsburgh, PA 15260, USA.
Michelle ArkinSmall Molecule Discovery Center, Pharmaceutical Chemistry, School of Pharmacy, University of California, San Francisco, CA 94143, USA.
Sriram SubramaniamLaboratory of Cell Biology, National Cancer Institute, Bethesda, MD 20892, USA. ss1@nih.gov.
National Cancer Institute · USUniversity of Pittsburgh · USLeidos (United States) · US

Funding

Technology Development for 3D Electron MicroscopyZIABC010826 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SUBRAMANIAM, SRIRAM · 2009 to 2019
$9.1M
Imaging cellular assemblies with three-dimensional electron microscopyZIABC010278 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SUBRAMANIAM, SRIRAM · 2009 to 2019
$8.0M
Structural Analysis of Macromolecular Complexes by Electron MicroscopyZIABC010412 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI MILNE, JACQUELINE · 2009 to 2019
$2.7M
CCR NIH HHS HHSN261200800001CHoward Hughes Medical InstituteIntramural NIH HHS ZIA BC010278NCI NIH HHS HHSN261200800001E
6 · The paper itself

Abstract

p97 is a hexameric AAA+ adenosine triphosphatase (ATPase) that is an attractive target for cancer drug development. We report cryo-electron microscopy (cryo-EM) structures for adenosine diphosphate (ADP)-bound, full-length, hexameric wild-type p97 in the presence and absence of an allosteric inhibitor at resolutions of 2.3 and 2.4 angstroms, respectively. We also report cryo-EM structures (at resolutions of ~3.3, 3.2, and 3.3 angstroms, respectively) for three distinct, coexisting functional states of p97 with occupancies of zero, one, or two molecules of adenosine 5'-O-(3-thiotriphosphate) (ATPγS) per protomer. A large corkscrew-like change in molecular architecture, coupled with upward displacement of the N-terminal domain, is observed only when ATPγS is bound to both the D1 and D2 domains of the protomer. These cryo-EM structures establish the sequence of nucleotide-driven structural changes in p97 at atomic resolution. They also enable elucidation of the binding mode of an allosteric small-molecule inhibitor to p97 and illustrate how inhibitor binding at the interface between the D1 and D2 domains prevents propagation of the conformational changes necessary for p97 function.

Indexed as

Adenosine DiphosphateAdenosine TriphosphatasesAdenosine TriphosphateAllosteric RegulationBinding SitesCryoelectron MicroscopyEnzyme InhibitorsHumansModels, MolecularNuclear ProteinsProtein Structure, Tertiaryadenosine 5'-O-(3-thiotriphosphate)Adenosine DiphosphateAdenosine TriphosphatasesAdenosine TriphosphateEnzyme InhibitorsNuclear Proteinsp97 ATPase

Identifiers

PMID26822609
PMCPMC6946184
OpenAlexW2259068415

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.