Evidence map›Paper›PMID 26820647›Full record

ArticlePloS one2016

Molecular Genetics External Quality Assessment Pilot Scheme for Irinotecan-Related UGT1A1 Genotyping in China.

Lang Yi, Guigao Lin, Kuo Zhang, Lunan Wang, Rui Zhang, Jiehong Xie, Jinming Li

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Lang YiNational Center for Clinical Laboratories, Beijing Hospital, Beijing 100730, P R China.
Guigao LinNational Center for Clinical Laboratories, Beijing Hospital, Beijing 100730, P R China.
Kuo ZhangNational Center for Clinical Laboratories, Beijing Hospital, Beijing 100730, P R China.
Lunan WangNational Center for Clinical Laboratories, Beijing Hospital, Beijing 100730, P R China.
Rui ZhangNational Center for Clinical Laboratories, Beijing Hospital, Beijing 100730, P R China.
Jiehong XieNational Center for Clinical Laboratories, Beijing Hospital, Beijing 100730, P R China.
Jinming LiNational Center for Clinical Laboratories, Beijing Hospital, Beijing 100730, P R China.
National Center for Clinical Laboratories · CNBeijing Hospital · CNChinese Academy of Medical Sciences & Peking Union Medical College · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Irinotecan is widely used in the treatment of solid tumors, especially in colorectal cancer and lung cancer. Molecular testing for UGT1A1 genotyping is increasingly required in China for optimum irinotecan administration. In order to determine the performance of laboratories with regard to the whole testing process for UGT1A1 to ensure the consistency and accuracy of the test results, the National Center for Clinical Laboratories conducted an external quality assessment program for UGT1A1*28 genotyping in 2015. The panel, which comprised of four known mutational samples and six wild-type samples, was distributed to 45 laboratories that test for the presence of UGT1A1*28 polymorphisms. Participating laboratories were allowed to perform polymorphism analysis by using their routine methods. The accuracy of the genotyping and reporting of results was analyzed. Other information from the individual laboratories, including the number of samples tested each month, accreditation/certification status, and test methodology, was reviewed. Forty-four of the 45 participants reported the correct results for all samples. There was only one genotyping error, with a corresponding analytical sensitivity of 99.44% (179/180 challenges; 95% confidence interval: 96.94-99.99%) and an analytical specificity of 100% (270/270 challenges; 95% confidence interval: 98.64-100%). Both commercial kits and laboratory development tests were commonly used by the laboratories, and pyrosequencing was the main methodology used (n = 26, 57.8%). The style of the written reports showed large variation, and many reports showed a shortage of information. In summary, the first UGT1A1 genotyping external quality assessment result demonstrated that UGT1A1 genotype analysis of good quality was performed in the majority of pharmacogenetic testing centers that were investigated. However, greater education on the reporting of UGT1A1 genetic testing results is needed.

Indexed as

Antineoplastic Agents, PhytogenicCamptothecinCell LineChinaGenotypeGenotyping TechniquesGlucuronosyltransferaseHumansIrinotecanNeoplasmsPharmacogeneticsPolymorphism, GeneticTopoisomerase I InhibitorsUGT1A1 EnzymeAntineoplastic Agents, PhytogenicCamptothecinGlucuronosyltransferaseIrinotecanTopoisomerase I InhibitorsUGT1A1 Enzyme

Identifiers

PMID26820647
PMCPMC4731084
OpenAlexW2419411206

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.