Evidence map›Paper›PMID 26820066›Full record

ArticleGenetics in medicine : official journal of the American College of Medical Genetics2016

Hypomorphic mutations identified in the candidate Leber congenital amaurosis gene CLUAP1.

Zachry T Soens, Yuanyuan Li, Li Zhao, Aiden Eblimit, Rachayata Dharmat, Yumei Li, Yiyun Chen, Mohammed Naqeeb, Norma Fajardo, Irma Lopez and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Genetics in medicine : official journal of the American College of Medical Genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 42 citations in OpenAlex.

  1. CLUAP1 variants cause non-syndromic retinitis pigmentosa.Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2026
    Article
  2. Review
  3. Ciliary Defects in Inherited Retinal Diseases.Advanced genetics (Hoboken, N.J.) · 2026
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 3 countries.

Zachry T SoensDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA.ORCID 0000-0003-4701-4867
Yuanyuan LiDepartment of Genetics, Yale University School of Medicine, New Haven, Connecticut, USA.ORCID 0000-0003-4227-8628
Li ZhaoHuman Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, USA.
Aiden EblimitDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA.ORCID 0000-0002-7743-6385
Rachayata DharmatDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA.ORCID 0000-0001-6969-4459
Yumei LiDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA.
Yiyun ChenDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA.
Mohammed NaqeebDepartment of Ophthalmology, Um Al Qura University Medical School, Makkah, Saudi Arabia.
Norma FajardoMcGill Ocular Genetics Laboratory and Centre, Department of Ophthalmology, McGill University Health Centre, Montreal, Quebec, Canada.
Irma LopezMcGill Ocular Genetics Laboratory and Centre, Department of Ophthalmology, McGill University Health Centre, Montreal, Quebec, Canada.
Zhaoxia SunDepartment of Genetics, Yale University School of Medicine, New Haven, Connecticut, USA.
Robert K KoenekoopMcGill Ocular Genetics Laboratory and Centre, Department of Ophthalmology, McGill University Health Centre, Montreal, Quebec, Canada.
Rui ChenDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA.
Baylor College of Medicine · USMcGill University Health Centre · CAUmm al-Qura University · SAYale University · US

Funding

VISION RESEARCH CENTERP30EY002520 · NEI · BAYLOR COLLEGE OF MEDICINE · PI Samuel M Wu · 1985 to 2026
$14.8M
GENETICS OF EARLY ONSET RETINAL DISEASESR01EY018571 · NEI · UNIVERSITY OF CALIFORNIA-IRVINE · PI RUI CHEN · 2008 to 2026
$7.2M
PROGRAM IN HUMAN MOLECULAR GENETICST32GM008307 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI SHAULSKY, GAD · 1990 to 2020
$6.6M
Molecular Basis of Human Visual System DisordersR01EY022356 · NEI · UNIVERSITY OF CALIFORNIA-IRVINE · PI RUI CHEN · 2012 to 2026
$6.1M
Center for Polycystic Kidney Disease Research at YaleP30DK090744 · NIDDK · YALE UNIVERSITY · PI CAPLAN, MICHAEL J. · 2010 to 2014
$5.6M
VISUAL SCIENCEST32EY007001 · NEI · BAYLOR COLLEGE OF MEDICINE · PI Samuel M Wu · 1985 to 2026
$3.7M
Intraciliary calcium directs cardiac left-right asymmetryR01HL125885 · NHLBI · YALE UNIVERSITY · PI BRUECKNER, MARTINA, SUN, ZHAOXIA · 2015 to 2018
$2.3M
Function of Ruvbl1-Ruvbl2 in dynein arm assembly in motile ciliated epithelial cellsR01HL175156 · NHLBI · YALE UNIVERSITY · PI ZHAOXIA SUN · 2024 to 2026
$2.1M
Investigate kidney cyst formation and a cilia-mediated signaling networkR01DK092808 · NIDDK · YALE UNIVERSITY · PI SUN, ZHAOXIA · 2012 to 2015
$1.4M
FGI: Acquisition of an Illumina Genome Analyzer System for Functional Genomic ResS10RR026550 · NCRR · BAYLOR COLLEGE OF MEDICINE · PI CHEN, RUI · 2010 to 2010
$500k
NCRR NIH HHS S10 RR026550NEI NIH HHS P30 EY002520NEI NIH HHS R01 EY018571NEI NIH HHS R01 EY022356NEI NIH HHS T32 EY007001NHLBI NIH HHS R01 HL125885NHLBI NIH HHS R01 HL175156NIDDK NIH HHS P30 DK090744NIDDK NIH HHS R01 DK092808NIGMS NIH HHS T32 GM008307
6 · The paper itself

Abstract

purposeLeber congenital amaurosis (LCA) is an early-onset form of retinal degeneration. Six of the 22 known LCA genes encode photoreceptor ciliary proteins. Despite the identification of 22 LCA genes, the genetic basis of ~30% of LCA patients remains unknown. We sought to investigate the cause of disease in the remaining 30% by examining cilia-associated genes.

methodsWhole-exome sequencing was performed on an LCA cohort of 212 unsolved probands previously screened for mutations in known retinal-disease genes. Immunohistochemistry using mouse retinas was used to confirm protein localization and zebrafish were used to perform rescue experiments.

resultsA homozygous nonsynonymous mutation was found in a single proband in CLUAP1, a gene required for ciliogenesis and cilia maintenance. Cluap1 knockout zebrafish exhibit photoreceptor cell death as early as 5 days after fertilization, and rescue experiments revealed that our proband's mutation is significantly hypomorphic.

conclusionConsistent with the knowledge that CLUAP1 plays an important role in cilia function and that cilia are critical to photoreceptor function, our results indicate that hypomorphic mutations in CLUAP1 can result in dysfunctional photoreceptors without systemic abnormalities. This is the first report linking mutations in CLUAP1 to human disease and establishes CLUAP1 as a candidate LCA gene.Genet Med 18 10, 1044-1051.

Indexed as

AnimalsAntigens, NeoplasmChild, PreschoolCiliaExomeFemaleHigh-Throughput Nucleotide SequencingHumansLeber Congenital AmaurosisMaleMutationPhotoreceptor CellsRetinal DegenerationZebrafishAntigens, NeoplasmCLUAP1 protein, human

Identifiers

PMID26820066
PMCPMC4965339
OpenAlexW2414198985

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.