ReviewBioinformatics and biology insights2015
Evolutionary Character of Alternative Splicing in Plants.
Review in Bioinformatics and biology insights, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.
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Who cites it
26 citing papers in PubMed.
- LYM2 mediates chitin-induced plasmodesmal flux reduction inFrontiers in plant science · 2026Article
- Mechanistic Insights into Alternative Gene Splicing in Oxidative Stress and Tissue Injury.Antioxidants & redox signaling · 2024Review
- Responsive Alternative Splicing Events ofInternational journal of molecular sciences · 2024Article
- MkcDBGAS: a reference-free approach to identify comprehensive alternative splicing events in a transcriptome.Briefings in bioinformatics · 2023Article
- Alternative splicing as a source of phenotypic diversity.Nature reviews. Genetics · 2022Review
- Temporal regulation of alternative splicing events in rice memory under drought stress.Plant diversity · 2022Article
- Applications of Multi-Omics Technologies for Crop Improvement.Frontiers in plant science · 2021Review
- Changes in Alternative Splicing in Response to Domestication and Polyploidization in Wheat.Plant physiology · 2020Article
- Distinct Evolutionary Origins of Intron Retention Splicing Events inFrontiers in plant science · 2020Article
- Hybrid Sequencing of Full-Length cDNA Transcripts of the Medicinal PlantInternational journal of molecular sciences · 2019Article
- RNA-seq reveals the involvement of key genes for aerobic adaptation in rice.Scientific reports · 2019Article
- Iso-Seq Allows Genome-Independent Transcriptome Profiling of Grape Berry Development.G3 (Bethesda, Md.) · 2019Article
- Expanding Alternative Splicing Identification by Integrating Multiple Sources of Transcription Data in Tomato.Frontiers in plant science · 2019Article
- New Era in Plant Alternative Splicing Analysis Enabled by Advances in High-Throughput Sequencing (HTS) Technologies.Frontiers in plant science · 2019Article
- Comparative analysis of the accelerated aged seed transcriptome profiles of two maize chromosome segment substitution lines.PloS one · 2019Article
- Origin of exon skipping-rich transcriptomes in animals driven by evolution of gene architecture.Genome biology · 2018Article
- The comparison of alternative splicing among the multiple tissues in cucumber.BMC plant biology · 2018Article
- Isoform Evolution in Primates through Independent Combination of Alternative RNA Processing Events.Molecular biology and evolution · 2017Article
- Identification and analysis of alternative splicing events in Phaseolus vulgaris and Glycine max.BMC genomics · 2017Article
- New insights into the operative network of FaEO, an enone oxidoreductase from Fragaria x ananassa Duch.Plant molecular biology · 2017Article
Corrections and comments
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Authors and funding
3 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Alternative splicing (AS) is one of the most important ways to enhance the functional diversity of genes. Huge amounts of data have been produced by microarray, expressed sequence tag, and RNA-seq, and plenty of methods have been developed specifically for this task. The most frequently asked questions in previous research were as follows. What is the content rate of AS genes among the whole gene set? How many AS types are presented in the genome, and which type is dominant? How about the conservation ability of AS among different species? Which kinds of isoforms from some genes have the environmental response to help individual adaptation? Based on this background, we collected analysis results from 17 species to try to map out the landscape of AS studies in plants. We have noted the shortages of previous results, and we appeal to all scientists working in the AS field to make a standard protocol so that analyses between different projects are comparable.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.