Evidence map›Paper›PMID 26818729›Full record

ArticleJournal of neurology, neurosurgery, and psychiatry2016

Genome-wide association study of sporadic brain arteriovenous malformations.

Shantel Weinsheimer, Nasrine Bendjilali, Jeffrey Nelson, Diana E Guo, Jonathan G Zaroff, Stephen Sidney, Charles E McCulloch, Rustam Al-Shahi Salman, Jonathan N Berg, Bobby P C Koeleman and 12 more

Open access · greenAbstract read
In one paragraph

Article in Journal of neurology, neurosurgery, and psychiatry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 3 pooled it
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 3 syntheses or guidelines pooled it, 35 citations in OpenAlex.

  1. Cerebrovascular malformations different from AVMs in patients with hereditary hemorrhagic telangiectasia: a systematic review.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2025
    Pooled it
  2. Pooled it
  3. Genetic susceptibility to cerebrovascular disease: A systematic review.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2018
    Pooled it
  4. Review
  5. Review
  6. Review
  7. Basic Knowledge and Overview of Brain AVMs.Journal of neuroendovascular therapy · 2025
    Review
  8. Article
  9. Article
  10. Editorial: Veins in the brain.Frontiers in surgery · 2023
    Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. The Roles of TGF-β Signaling in Cerebrovascular Diseases.Frontiers in cell and developmental biology · 2020
    Review
  16. Perivascular neurotransmitters: Regulation of cerebral blood flow and role in primary headaches.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2019
    Review
  17. Identification of a rareHuman genome variation · 2018
    Article
  18. Pathogenesis of Brain Arteriovenous Malformations.Neurologia medico-chirurgica · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 12 institutions in 7 countries.

Shantel WeinsheimerMental Health Center, Sct. Hans MHS-Capital Region of Denmark, Institute of Biological Psychiatry, Roskilde, Denmark.
Nasrine BendjilaliDepartment of Mathematics, Rowan University, Glassboro, New Jersey, USA.
Jeffrey NelsonDepartment of Anesthesia and Perioperative Care, Center for Cerebrovascular Research, University of California, San Francisco, California, USA.
Diana E GuoDepartment of Anesthesia and Perioperative Care, Center for Cerebrovascular Research, University of California, San Francisco, California, USA.
Jonathan G ZaroffDivision of Research, Kaiser Permanente of Northern California, Oakland, California, USA.
Stephen SidneyDivision of Research, Kaiser Permanente of Northern California, Oakland, California, USA.
Charles E McCullochDepartment of Epidemiology and Biostatistics, University of California, San Francisco, California, USA.
Rustam Al-Shahi SalmanCentre for Clinical Brain Sciences, University of Edinburgh, Edinburgh, UK.ORCID 0000-0002-2108-9222
Jonathan N BergDepartment of Clinical Genetics, University of Dundee, Dundee, UK.
Bobby P C KoelemanDepartment of Medical Genetics, University Medical Center, Utrecht, The Netherlands.
Matthias SimonDepartment of Neurosurgery, University of Bonn Medical Center, Bonn, Germany.
Azize BostroemDepartment of Neurosurgery, University of Bonn Medical Center, Bonn, Germany.
Marco FontanellaDivision of Neurosurgery, University of Torino, University of Brescia, Brescia, Italy.
Carmelo L SturialeInstitute of Neurosurgery, Catholic University of Rome, Rome, Italy.
Roberto PolaInstitute of Medicine, Catholic University of Rome, Rome, Italy.
Alfredo PucaInstitute of Neurosurgery, Catholic University of Rome, Rome, Italy.
Michael T LawtonDepartment of Neurological Surgery, University of California, San Francisco, California, USA.
William L YoungDepartment of Anesthesia and Perioperative Care, Center for Cerebrovascular Research, University of California, San Francisco, California, USA.
Ludmila PawlikowskaDepartment of Anesthesia and Perioperative Care, Center for Cerebrovascular Research, University of California, San Francisco, California, USA Institute for Human Genetics, University of California, San Francisco, California, USA.
Catharina J M KlijnDepartment of Neurology, Radboud University Medical Center, Nijmegen, The Netherlands.
Helen KimDepartment of Anesthesia and Perioperative Care, Center for Cerebrovascular Research, University of California, San Francisco, California, USA Department of Epidemiology and Biostatistics, University of California, San Francisco, California, USA Institute for Human Genetics, University of California, San Francisco, California, USA.
GEN-AVM Consortium
University of California, San Francisco · USKaiser Permanente · USUniversità Cattolica del Sacro Cuore · ITUniversity of Bonn · DEBrescia University · USCatholic University of America · USRadboud University Nijmegen · NLRowan University · USSankt Hans Hospital · DKUniversity Medical Center · USUniversity of Dundee · GBUniversity of Edinburgh · GB

Funding

Quantitative Biology CoreU19AI063603 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI YATES III, JOHN R · 2004 to 2015
$26.4M
Underlying mechanisms for the pro-angiogenic phenotype of AVMsP01NS044155 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HASHIMOTO, TOMOKI · 2003 to 2013
$12.8M
PREDICTORS OF SPONTANEOUS CEREBRAL AVM HEMORRHAGER01NS034949 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KIM, HELEN · 1995 to 2017
$6.5M
Genetic influences on clinical outcome in brain arteriovenous malformationsK23NS058357 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KIM, HELEN · 2008 to 2012
$813k
Chief Scientist Office CZD/16/6/4Medical Research Council G1001799Medical Research Council G1002605Medical Research Council G108/613Medical Research Council MR/N01104X/1NIAID NIH HHS U19 AI063603NINDS NIH HHS K23 NS058357NINDS NIH HHS P01 NS044155NINDS NIH HHS R01 NS034949Wellcome Trust 076113Wellcome Trust 085475
6 · The paper itself

Abstract

backgroundThe pathogenesis of sporadic brain arteriovenous malformations (BAVMs) remains unknown, but studies suggest a genetic component. We estimated the heritability of sporadic BAVM and performed a genome-wide association study (GWAS) to investigate association of common single nucleotide polymorphisms (SNPs) with risk of sporadic BAVM in the international, multicentre Genetics of Arteriovenous Malformation (GEN-AVM) consortium.

methodsThe Caucasian discovery cohort included 515 BAVM cases and 1191 controls genotyped using Affymetrix genome-wide SNP arrays. Genotype data were imputed to 1000 Genomes Project data, and well-imputed SNPs (>0.01 minor allele frequency) were analysed for association with BAVM. 57 top BAVM-associated SNPs (51 SNPs with p<10(-05) or p<10(-04) in candidate pathway genes, and 6 candidate BAVM SNPs) were tested in a replication cohort including 608 BAVM cases and 744 controls.

resultsThe estimated heritability of BAVM was 17.6% (SE 8.9%, age and sex-adjusted p=0.015). None of the SNPs were significantly associated with BAVM in the replication cohort after correction for multiple testing. 6 SNPs had a nominal p<0.1 in the replication cohort and map to introns in EGFEM1P, SP4 and CDKAL1 or near JAG1 and BNC2. Of the 6 candidate SNPs, 2 in ACVRL1 and MMP3 had a nominal p<0.05 in the replication cohort.

conclusionsWe performed the first GWAS of sporadic BAVM in the largest BAVM cohort assembled to date. No GWAS SNPs were replicated, suggesting that common SNPs do not contribute strongly to BAVM susceptibility. However, heritability estimates suggest a modest but significant genetic contribution.

Indexed as

Genome-Wide Association StudyAdultCohort StudiesFemaleGene FrequencyGenetic Predisposition to DiseaseGenotypeHumansIntracranial Arteriovenous MalformationsMalePolymorphism, Single NucleotideWhite People

Identifiers

PMID26818729
PMCPMC4963303
OpenAlexW2306783063

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.