Evidence map›Paper›PMID 26818670›Full record

ArticleJournal of clinical microbiology2016

Pneumococcus with the "6E" cps Locus Produces Serotype 6B Capsular Polysaccharide.

Robert L Burton, K Aaron Geno, Jamil S Saad, Moon H Nahm

Abstract read
In one paragraph

Article in Journal of clinical microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Review
  2. Genome sequences of 36Microbiology resource announcements · 2024
    Article
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  8. A novel genetic variant of Streptococcus pneumoniae serotype 11A discovered in Fiji.Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases · 2018
    Article
  9. Article
  10. WciGJournal of clinical microbiology · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Robert L BurtonDepartment of Pathology, University of Alabama at Birmingham, Birmingham, Alabama, USA.
K Aaron GenoDepartment of Pathology, University of Alabama at Birmingham, Birmingham, Alabama, USA.
Jamil S SaadDepartment of Microbiology, University of Alabama at Birmingham, Birmingham, Alabama, USA.
Moon H NahmDepartment of Pathology, University of Alabama at Birmingham, Birmingham, Alabama, USA Department of Microbiology, University of Alabama at Birmingham, Birmingham, Alabama, USA nahm@uab.edu.

Funding

Training Program in Lung Biology and Translational MedicineT32HL105346 · NHLBI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI GAGGAR, AMIT · 2010 to 2025
$5.0M
NHLBI NIH HHS T32 HL105346NHLBI NIH HHS T32HL105346NIAID NIH HHS HHSN272201200005CPHS HHS HHSN272201200005C
6 · The paper itself

Abstract

Genetic studies of serogroup 6 isolates ofStreptococcus pneumoniaeidentified putative serotype 6E. Although its capsular polysaccharide structure has not been elucidated, putative serotype 6E is described in an increasing number of studies as a potentially new serotype. We show here that SPEC6B, which is widely used as a target strain for serotype 6B opsonophagocytosis assays, has the genetic features of the putative serotype 6E but produces capsular polysaccharide identical to 6B capsular polysaccharide as determined by one-dimensional (1D) and 2D nuclear magnetic resonance (NMR). Thus, putative serotype 6E is a mere genetic variant of serotype 6B. Also, SPEC6B is appropriate as a target strain for serotype 6B opsonophagocytosis assays. This example illustrates the difficulties of assigning new bacterial serotypes based on genetic findings alone.

Indexed as

GenotypeSerogroupMagnetic Resonance SpectroscopyPolysaccharides, BacterialStreptococcus pneumoniaePolysaccharides, Bacterial

Identifiers

PMID26818670
PMCPMC4809907

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.