Evidence map›Paper›PMID 26818253›Full record

ArticleFEMS microbiology letters2016

Pleiotropic consequences of gene knockouts in the phthiocerol dimycocerosate and phenolic glycolipid biosynthetic gene cluster of the opportunistic human pathogen Mycobacterium marinum.

Poornima Mohandas, William C Budell, Emily Mueller, Andrew Au, Glennon V Bythrow, Luis E N Quadri

Open access · greenAbstract read
In one paragraph

Article in FEMS microbiology letters, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 41 citations in OpenAlex.

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  9. TheMicroorganisms · 2023
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  11. Drug-resistant strains ofFrontiers in cellular and infection microbiology · 2023
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  12. Pathogens (Basel, Switzerland) · 2022
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  13. Article
  14. Review
  15. Review
  16. Review
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Poornima MohandasBiology Department, Brooklyn College, City University of New York, Brooklyn, NY 11210, USA Biology Program, Graduate Center, City University of New York, NY 10016, USA.
William C BudellBiology Department, Brooklyn College, City University of New York, Brooklyn, NY 11210, USA Biology Program, Graduate Center, City University of New York, NY 10016, USA.
Emily MuellerBiology Department, Brooklyn College, City University of New York, Brooklyn, NY 11210, USA.
Andrew AuBiology Department, Brooklyn College, City University of New York, Brooklyn, NY 11210, USA.
Glennon V BythrowBiology Department, Brooklyn College, City University of New York, Brooklyn, NY 11210, USA Biology Program, Graduate Center, City University of New York, NY 10016, USA.
Luis E N QuadriBiology Department, Brooklyn College, City University of New York, Brooklyn, NY 11210, USA Biology Program, Graduate Center, City University of New York, NY 10016, USA LQuadri@brooklyn.cuny.edu.
Brooklyn College · USThe Graduate Center, CUNY · USCity University of New York · US

Funding

BIOSYNTHESIS OF MYCOBACTERIAL DIMYCOCEROSATE ESTER VIRULENCE FACTORSR15AI105884 · NIAID · BROOKLYN COLLEGE · PI QUADRI, LUIS E · 2014 to 2014
$431k
NIAID NIH HHS R15 AI105884NIAID NIH HHS R15AI105884
6 · The paper itself

Abstract

Phthiocerol dimycocerosates (PDIMs) and phenolic glycolipids (PGLs) contribute to the pathogenicity of several mycobacteria. Biosynthesis of these virulence factors requires polyketide synthases and other enzymes that represent potential targets for the development of adjuvant antivirulence drugs. We used six isogenic Mycobacterium marinum mutants, each with a different gene knockout in the PDIM/PGL biosynthetic pathway, to probe the pleiotropy of mutations leading to PDIM(-) PGL(-), PDIM(+) PGL(-) or PDIM(-) PGL(+) phenotypes. We evaluated the M. marinum mutants for changes in antibiotic susceptibility, cell envelope permeability, biofilm formation, surface properties, sliding motility and virulence in an amoeba model. The analysis also permitted us to begin exploring the hypothesis that different gene knockouts rendering the same PDIM and/or PGL deficiency phenotypes lead to M. marinum mutants with equivalent pleiotropic profiles. Overall, the results of our study revealed a complex picture of pleiotropic patterns emerging from different gene knockouts, uncovered unexpected phenotypic inequalities between mutants, and provided new insight into the phenotypic consequences of gene knockouts in the PDIM/PGL biosynthetic pathway.

Indexed as

BiofilmsCell MembraneCell WallDictyosteliumGene Knockout TechniquesGlycolipidsHumansLipidsMycobacterium marinumPolyketide SynthasesVirulence FactorsGlycolipidsLipidsphthiocerol dimycocerosatePolyketide SynthasesVirulence Factorsamoebabiofilmcell wall biosynthesisMycobacteriumouter membrane lipidspolyketide

Identifiers

PMID26818253
PMCPMC4809995
OpenAlexW2285836243

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.