Evidence map›Paper›PMID 26818177›Full record

ArticleRNA biology2016

Studies on human eRF3-PABP interaction reveal the influence of eRF3a N-terminal glycin repeat on eRF3-PABP binding affinity and the lower affinity of eRF3a 12-GGC allele involved in cancer susceptibility.

Soumaya Jerbi, Béatrice Jolles, Tahar Bouceba, Olivier Jean-Jean

Open access · hybridAbstract read
In one paragraph

Article in RNA biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Review
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  4. Article
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  6. Article
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  8. Article
  9. Trans-acting translational regulatory RNA binding proteins.Wiley interdisciplinary reviews. RNA · 2018
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Soumaya Jerbia Sorbonne Universités, UPMC Univ Paris 06, Institut de Biologie Paris-Seine (IBPS), CNRS-UMR8256 , 7 quai Saint Bernard, Paris , France.
Béatrice Jollesa Sorbonne Universités, UPMC Univ Paris 06, Institut de Biologie Paris-Seine (IBPS), CNRS-UMR8256 , 7 quai Saint Bernard, Paris , France.
Tahar Boucebab Sorbonne Universités, UPMC Univ Paris 06, Institut de Biologie Paris-Seine (IBPS), CNRS-FR3631 , 7 quai Saint Bernard, Paris , France.
Olivier Jean-Jeana Sorbonne Universités, UPMC Univ Paris 06, Institut de Biologie Paris-Seine (IBPS), CNRS-UMR8256 , 7 quai Saint Bernard, Paris , France.
Sorbonne Université · FRCentre National de la Recherche Scientifique · FRInstitut de Biologie Paris-Seine · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The eukaryotic release factor 3 (eRF3) has been involved in the control of mRNA degradation through its association with the cytoplasmic Poly(A) Binding Protein, PABP. In mammals, eRF3 N-terminal domain contains two overlapping PAM2 motifs which specifically recognize the MLLE domain of PABP. In humans, eRF3a/GSPT1 gene contains a stable GGC repeat encoding a repeat of glycine residues in eRF3a N-terminus. There are five known eRF3a/GSPT1 alleles in the human population, encoding 7, 9, 10, 11 and 12 glycines. Several studies have reported that the presence of eRF3a 12-GGC allele is correlated with an increased risk of cancer development. Using surface plasmon resonance, we have studied the interaction of the various allelic forms of eRF3a with PABP alone or poly(A)-bound PABP. We found that the N-terminal glycine repeat of eRF3a influences eRF3a-PABP interaction and that eRF3a 12-GGC allele has a decreased binding affinity for PABP. Our comparative analysis on eRF3a alleles suggests that the presence of eRF3a 12-GGC allele could modify the coupling between translation termination and mRNA deadenylation.

Indexed as

Genetic VariationAllelesBinding SitesGenetic Predisposition to DiseaseGlycineHumansModels, MolecularNeoplasmsPeptide Termination FactorsPoly(A)-Binding ProteinsProtein BindingRNA, MessengerSurface Plasmon ResonanceGlycinepeptide-chain-release factor 3Peptide Termination FactorsPoly(A)-Binding ProteinsRNA, MessengerCancereRF3GSPT1GSPT2mRNA degradationmRNA poly(A) tailPABPsurface plasmon resonancetranslation termination

Identifiers

PMID26818177
PMCPMC4829321
OpenAlexW2257603407

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.