Evidence map›Paper›PMID 26817843›Full record

ArticleThe Journal of biological chemistry2016

Characterization of a Unique Pathway for 4-Cresol Catabolism Initiated by Phosphorylation in Corynebacterium glutamicum.

Lei Du, Li Ma, Feifei Qi, Xianliang Zheng, Chengying Jiang, Ailei Li, Xiaobo Wan, Shuang-Jiang Liu, Shengying Li

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
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  4. Bacterial catabolism of acetovanillone, a lignin-derived compound.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  5. The Catabolic System of Acetovanillone and Acetosyringone inApplied and environmental microbiology · 2022
    Article
  6. Review
  7. Review
  8. Article
  9. Review
  10. Physiological Response ofMicroorganisms · 2020
    Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Selective oxidation of aliphatic C-H bonds in alkylphenols by a chemomimetic biocatalytic system.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Lei DuFrom the CAS Key Laboratory of Biofuels, Shandong Provincial Key Laboratory of Synthetic Biology and the University of the Chinese Academy of Sciences, Beijing 100049, China, and.
Li MaFrom the CAS Key Laboratory of Biofuels, Shandong Provincial Key Laboratory of Synthetic Biology and.
Feifei QiFrom the CAS Key Laboratory of Biofuels, Shandong Provincial Key Laboratory of Synthetic Biology and.
Xianliang ZhengFrom the CAS Key Laboratory of Biofuels, Shandong Provincial Key Laboratory of Synthetic Biology and the University of the Chinese Academy of Sciences, Beijing 100049, China, and.
Chengying Jiangthe State Key Laboratory of Microbial Resources, and Environmental Microbiology and Biotechnology Research Center at Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China.
Ailei Lithe CAS Key Laboratory of Bio-based Materials at Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, Shandong 266101, China.
Xiaobo Wanthe CAS Key Laboratory of Bio-based Materials at Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, Shandong 266101, China.
Shuang-Jiang Liuthe State Key Laboratory of Microbial Resources, and Environmental Microbiology and Biotechnology Research Center at Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China liusj@im.ac.cn.
Shengying LiFrom the CAS Key Laboratory of Biofuels, Shandong Provincial Key Laboratory of Synthetic Biology and lishengying@qibebt.ac.cn.
State Key Laboratory of Synthetic Chemistry · CNChinese Academy of Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

4-Cresol is not only a significant synthetic intermediate for production of many aromatic chemicals, but also a priority environmental pollutant because of its toxicity to higher organisms. In our previous studies, a gene cluster implicated to be involved in 4-cresol catabolism, creCDEFGHIR, was identified in Corynebacterium glutamicum and partially characterized in vivo. In this work, we report on the discovery of a novel 4-cresol biodegradation pathway that employs phosphorylated intermediates. This unique pathway initiates with the phosphorylation of the hydroxyl group of 4-cresol, which is catalyzed by a novel 4-methylbenzyl phosphate synthase, CreHI. Next, a unique class I P450 system, CreJEF, specifically recognizes phosphorylated intermediates and successively oxidizes the aromatic methyl group into carboxylic acid functionality via alcohol and aldehyde intermediates. Moreover, CreD (phosphohydrolase), CreC (alcohol dehydrogenase), and CreG (aldehyde dehydrogenase) were also found to be required for efficient oxidative transformations in this pathway. Steady-state kinetic parameters (Km and kcat) for each catabolic step were determined, and these results suggest that kinetic controls serve a key role in directing the metabolic flux to the most energy effective route.

Indexed as

Metabolic Networks and PathwaysAdenosine TriphosphateBacterial ProteinsBiocatalysisCorynebacterium glutamicumCresolsCytochrome P-450 Enzyme SystemKineticsOxidoreductasesPhosphoric Monoester HydrolasesPhosphorylationPhosphotransferases4-cresolAdenosine TriphosphateBacterial ProteinsCresolsCytochrome P-450 Enzyme SystemOxidoreductasesPhosphoric Monoester HydrolasesPhosphotransferases4-cresolbiodegradationCorynebacterium glutamicumcytochrome P450gram-positive bacteriamicrobiologyphosphorylation

Identifiers

PMID26817843
PMCPMC4813557
OpenAlexW2287751202

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.