Evidence map›Paper›PMID 26817616›Full record

ArticleMolecular plant pathology2016

The FTF gene family regulates virulence and expression of SIX effectors in Fusarium oxysporum.

Jonathan Niño-Sánchez, Virginia Casado-Del Castillo, Vega Tello, José J De Vega-Bartol, Brisa Ramos, Serenella A Sukno, José María Díaz Mínguez

Open access · hybridAbstract read
In one paragraph

Article in Molecular plant pathology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
3.0field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 77 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Jonathan Niño-SánchezInstituto Hispano-Luso de Investigaciones Agrarias (Ciale), Departamento de Microbiología y Genética, Universidad de Salamanca, C/Río Duero 12, Villamayor, 37185, Salamanca, Spain.
Virginia Casado-Del CastilloInstituto Hispano-Luso de Investigaciones Agrarias (Ciale), Departamento de Microbiología y Genética, Universidad de Salamanca, C/Río Duero 12, Villamayor, 37185, Salamanca, Spain.
Vega TelloInstituto Hispano-Luso de Investigaciones Agrarias (Ciale), Departamento de Microbiología y Genética, Universidad de Salamanca, C/Río Duero 12, Villamayor, 37185, Salamanca, Spain.
José J De Vega-BartolInstituto de Biologia Experimental e Tecnológica/Instituto de Tecnologia Química e Biológica-Universidade Nova de Lisboa (IBET/ITQB-UNL), Av. República, 2784-505, Oeiras, Portugal.
Brisa RamosCentro de Biotecnología y Genómica de Plantas (CBGP), Universidad Politécnica de Madrid-INIA, Campus de Monteganceno, Pozuelo de Alarcón, 28223, Madrid, Spain.
Serenella A SuknoInstituto Hispano-Luso de Investigaciones Agrarias (Ciale), Departamento de Microbiología y Genética, Universidad de Salamanca, C/Río Duero 12, Villamayor, 37185, Salamanca, Spain.
José María Díaz MínguezInstituto Hispano-Luso de Investigaciones Agrarias (Ciale), Departamento de Microbiología y Genética, Universidad de Salamanca, C/Río Duero 12, Villamayor, 37185, Salamanca, Spain.
Universidad de Salamanca · ESCentre for Plant Biotechnology and Genomics · ESUniversidade Nova de Lisboa · PT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The FTF (Fusarium transcription factor) gene family comprises a single copy gene, FTF2, which is present in all the filamentous ascomycetes analysed, and several copies of a close relative, FTF1, which is exclusive to Fusarium oxysporum. An RNA-mediated gene silencing system was developed to target mRNA produced by all the FTF genes, and tested in two formae speciales: F. oxysporum f. sp. phaseoli (whose host is common bean) and F. oxysporum f. sp. lycopersici (whose host is tomato). Quantification of the mRNA levels showed knockdown of FTF1 and FTF2 in randomly isolated transformants of both formae speciales. The attenuation of FTF expression resulted in a marked reduction in virulence, a reduced expression of several SIX (Secreted In Xylem) genes, the best studied family of effectors in F. oxysporum, and lower levels of SGE1 (Six Gene Expression 1) mRNA, the presumptive regulator of SIX expression. Moreover, the knockdown mutants showed a pattern of colonization of the host plant similar to that displayed by strains devoid of FTF1 copies (weakly virulent strains). Gene knockout of FTF2 also resulted in a reduction in virulence, but to a lesser extent. These results demonstrate the role of the FTF gene expansion, mostly the FTF1 paralogues, as a regulator of virulence in F. oxysporum and suggest that the control of effector expression is the mechanism involved.

Indexed as

Gene Expression Regulation, FungalMultigene FamilyBlotting, SouthernFabaceaeFungal ProteinsFusariumGene DosageGenes, FungalGreen Fluorescent ProteinsHost-Pathogen InteractionsMutationPhylogenyPlant DiseasesRNA InterferenceSequence Homology, Nucleic AcidSolanum lycopersicumFungal ProteinsGreen Fluorescent ProteinsVirulence FactorseffectorFTFFusarium wiltgenomic expansionpathogenicitytranscription factorvirulence

Identifiers

PMID26817616
PMCPMC6638452
OpenAlexW2258931137

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.