Evidence map›Paper›PMID 26815657›Full record

ArticlePloS one2016

Identification of Genes Relevant to Pesticides and Biology from Global Transcriptome Data of Monochamus alternatus Hope (Coleoptera: Cerambycidae) Larvae.

Songqing Wu, Xiaoli Zhu, Zhaoxia Liu, Ensi Shao, Carballar-Lejarazú Rebeca, Yajie Guo, Yueting Xiong, Yani Mou, Runxue Xu, Xia Hu and 4 more

Abstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Transcriptome Analysis of the Japanese Pine Sawyer Beetle,Journal of fungi (Basel, Switzerland) · 2021
    Article
  6. Review
  7. Article
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Songqing WuCollege of Forestry, Fujian Agriculture and Forestry University, Fuzhou, 350002, People's Republic of China.
Xiaoli ZhuFujian-Taiwan Joint Center for Ecological Control of Crop Pests, Fujian Agriculture and Forestry University, Fuzhou, 350002, People's Republic of China.
Zhaoxia LiuFujian-Taiwan Joint Center for Ecological Control of Crop Pests, Fujian Agriculture and Forestry University, Fuzhou, 350002, People's Republic of China.
Ensi ShaoFujian-Taiwan Joint Center for Ecological Control of Crop Pests, Fujian Agriculture and Forestry University, Fuzhou, 350002, People's Republic of China.
Carballar-Lejarazú RebecaDepartment of Molecular Biology and Biochemistry, University of California Irvine, Irvine, CA, 92697, United States of America.
Yajie GuoCollege of Forestry, Fujian Agriculture and Forestry University, Fuzhou, 350002, People's Republic of China.
Yueting XiongCollege of Forestry, Fujian Agriculture and Forestry University, Fuzhou, 350002, People's Republic of China.
Yani MouCollege of Forestry, Fujian Agriculture and Forestry University, Fuzhou, 350002, People's Republic of China.
Runxue XuFujian-Taiwan Joint Center for Ecological Control of Crop Pests, Fujian Agriculture and Forestry University, Fuzhou, 350002, People's Republic of China.
Xia HuCollege of Forestry, Fujian Agriculture and Forestry University, Fuzhou, 350002, People's Republic of China.
Guanghong LiangCollege of Forestry, Fujian Agriculture and Forestry University, Fuzhou, 350002, People's Republic of China.
Shuangquan ZouCollege of Forestry, Fujian Agriculture and Forestry University, Fuzhou, 350002, People's Republic of China.
Xiong GuanFujian-Taiwan Joint Center for Ecological Control of Crop Pests, Fujian Agriculture and Forestry University, Fuzhou, 350002, People's Republic of China.
Feiping ZhangCollege of Forestry, Fujian Agriculture and Forestry University, Fuzhou, 350002, People's Republic of China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Monochamus alternatus Hope is the main vector in China of the Pine Wilt Disease caused by the pine wood nematode Bursaphelenchus xylophilus. Although chemical control is traditionally used to prevent pine wilt disease, new strategies based in biological control are promising ways for the management of the disease. However, there is no deep sequence analysis of Monochamus alternatus Hope that describes the transcriptome and no information is available about gene function of this insect vector. We used next generation sequencing technology to sequence the whole fourth instar larva transcriptome of Monochamus alternatus Hope and successfully built a Monochamus alternatus Hope transcriptome database. In total, 105,612 unigenes were assigned for Gene Ontology (GO) terms, information for 16,730 classified unigenes was obtained in the Clusters of Orthologous Groups (COGs) database, and 13,024 unigenes matched with 224 predicted pathways in the Kyoto Encyclopedia of Genes and Genome (KEGG). In addition, genes related to putative insecticide resistance-related genes, RNAi, the Bt receptor, intestinal digestive enzymes, possible future insect control targets and immune-related molecules are described. This study provides valuable basic information that can be used as a gateway to develop new molecular tools for Monochamus alternatus Hope control strategies.

Indexed as

TranscriptomeAnimalsColeopteraHigh-Throughput Nucleotide SequencingInsecticide ResistanceInsect ProteinsInsect VectorsLarvaPinusPlant DiseasesTylenchidaInsect Proteins

Identifiers

PMID26815657
PMCPMC4729689

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.