Evidence map›Paper›PMID 26814706›Full record

ArticleMolecular plant pathology2016

SlyA regulates phytotoxin production and virulence in Dickeya zeae EC1.

Jia-Nuan Zhou, Hai-Bao Zhang, Ming-Fa Lv, Yu-Fan Chen, Li-Sheng Liao, Ying-Ying Cheng, Shi-Yin Liu, Shao-Hua Chen, Fei He, Zi-Ning Cui and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular plant pathology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
5.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
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  9. Review
  10. Frontiers in plant science · 2023
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  11. Comparative Pathogenomic Analysis of Two Banana PathogenicInternational journal of molecular sciences · 2022
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  15. Isolation and Genome Analysis ofFrontiers in plant science · 2022
    Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 2 countries.

Jia-Nuan ZhouGuangdong Province Key Laboratory of Microbial Signals and Disease Control, Department of Plant Pathology, South China Agricultural University, Guangzhou, 510642, China.
Hai-Bao ZhangInstitute of Molecular and Cell Biology, 61 Biopolis Drive, Singapore, 138673.
Ming-Fa LvGuangdong Province Key Laboratory of Microbial Signals and Disease Control, Department of Plant Pathology, South China Agricultural University, Guangzhou, 510642, China.
Yu-Fan ChenGuangdong Province Key Laboratory of Microbial Signals and Disease Control, Department of Plant Pathology, South China Agricultural University, Guangzhou, 510642, China.
Li-Sheng LiaoGuangdong Province Key Laboratory of Microbial Signals and Disease Control, Department of Plant Pathology, South China Agricultural University, Guangzhou, 510642, China.
Ying-Ying ChengGuangdong Province Key Laboratory of Microbial Signals and Disease Control, Department of Plant Pathology, South China Agricultural University, Guangzhou, 510642, China.
Shi-Yin LiuGuangdong Province Key Laboratory of Microbial Signals and Disease Control, Department of Plant Pathology, South China Agricultural University, Guangzhou, 510642, China.
Shao-Hua ChenGuangdong Province Key Laboratory of Microbial Signals and Disease Control, Department of Plant Pathology, South China Agricultural University, Guangzhou, 510642, China.
Fei HeGuangdong Province Key Laboratory of Microbial Signals and Disease Control, Department of Plant Pathology, South China Agricultural University, Guangzhou, 510642, China.
Zi-Ning CuiGuangdong Province Key Laboratory of Microbial Signals and Disease Control, Department of Plant Pathology, South China Agricultural University, Guangzhou, 510642, China.
Zi-De JiangGuangdong Province Key Laboratory of Microbial Signals and Disease Control, Department of Plant Pathology, South China Agricultural University, Guangzhou, 510642, China.
Chang-Qing ChangGuangdong Province Key Laboratory of Microbial Signals and Disease Control, Department of Plant Pathology, South China Agricultural University, Guangzhou, 510642, China.
Lian-Hui ZhangGuangdong Province Key Laboratory of Microbial Signals and Disease Control, Department of Plant Pathology, South China Agricultural University, Guangzhou, 510642, China.
South China Agricultural University · CNInstitute of Molecular and Cell Biology · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Dickeya zeae is a causal agent of rice root rot disease. The pathogen is known to produce a range of virulence factors, including phytotoxic zeamines and extracellular enzymes, but the mechanisms of virulence regulation remain vague. In this study, we identified a SlyA/MarR family transcription factor SlyA in D. zeae strain EC1. Disruption of slyA significantly decreased zeamine production, enhanced swimming and swarming motility, reduced biofilm formation and significantly decreased pathogenicity on rice. Quantitative polymerase chain reaction (qPCR) analysis confirmed the role of SlyA in transcriptional modulation of a range of genes associated with bacterial virulence. In trans expression of slyA in expI mutants recovered the phenotypes of motility and biofilm formation, suggesting that SlyA is downstream of the acylhomoserine lactone-mediated quorum sensing pathway. Taken together, the findings from this study unveil a key transcriptional regulatory factor involved in the modulation of virulence factor production and overall pathogenicity of D. zeae EC1.

Indexed as

Bacterial ProteinsBiofilmsCell WallEnterobacteriaceaeGenes, PlantGenome, BacterialGerminationMacrolidesMovementMutationOryzaPolyaminesSeedsToxins, BiologicalTranscription, GeneticVirulenceBacterial ProteinsMacrolidesPolyaminesToxins, BiologicalzeamineD. zeaeregulationrice foot rotSlyAzeamines

Identifiers

PMID26814706
PMCPMC6638372
OpenAlexW2265225865

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.