Evidence map›Paper›PMID 26813947›Full record

ArticleEuropean journal of human genetics : EJHG2016

Variants of the ACTG2 gene correlate with degree of severity and presence of megacystis in chronic intestinal pseudo-obstruction.

Ivana Matera, Marta Rusmini, Yiran Guo, Margherita Lerone, Jiankang Li, Jianguo Zhang, Marco Di Duca, Paolo Nozza, Manuela Mosconi, Alessio Pini Prato and 9 more

Open access · bronzeAbstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed, 1 pooled it
6.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 1 synthesis or guideline pooled it, 51 citations in OpenAlex.

  1. Pooled it
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  13. Journal of neurogastroenterology and motility · 2022
    Article
  14. Expanding the genotypic spectrum ofCold Spring Harbor molecular case studies · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 4 institutions in 3 countries.

Ivana MateraU.O.C. Genetica Medica, Istituto Giannina Gaslini, Genova, Italy.
Marta RusminiU.O.C. Genetica Medica, Istituto Giannina Gaslini, Genova, Italy.
Yiran GuoCenter for Applied Genomics, Children's Hospital of Philadelphia, Philadelphia, PA, USA.ORCID 0000-0002-6549-8589
Margherita LeroneU.O.C. Genetica Medica, Istituto Giannina Gaslini, Genova, Italy.
Jiankang LiBGI-Shenzhen, Shenzhen, China.
Jianguo ZhangBGI-Shenzhen, Shenzhen, China.
Marco Di DucaLaboratory of Pathophysiology of Uremia, Istituto Giannina Gaslini, Genova, Italy.
Paolo NozzaPathology Unit, Istituto Giannina Gaslini, Genova, Italy.
Manuela MosconiPaediatric Surgery Unit, Istituto Giannina Gaslini, Genova, Italy.
Alessio Pini PratoPaediatric Surgery Unit, Istituto Giannina Gaslini, Genova, Italy.
Giuseppe MartuccielloPaediatric Surgery Unit, Istituto Giannina Gaslini, Genova, Italy.
Arrigo BarabinoGastroenterology and Endoscopy Unit, Istituto Giannina Gaslini, Genova, Italy.
Francesco MorandiU.O. Pediatria, Ospedale Sacra Famiglia, Erba (CO), Italy.
Roberto De GiorgioDepartment of Medical and Surgical Sciences, University of Bologna, St Orsola-Malpighi Hospital, Bologna, Italy.
Vincenzo StanghelliniDepartment of Medical and Surgical Sciences, University of Bologna, St Orsola-Malpighi Hospital, Bologna, Italy.
Roberto RavazzoloU.O.C. Genetica Medica, Istituto Giannina Gaslini, Genova, Italy.
Marcella DevotoDivision of Genetics, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Hakon HakonarsonCenter for Applied Genomics, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Isabella CeccheriniU.O.C. Genetica Medica, Istituto Giannina Gaslini, Genova, Italy.
Istituto Giannina Gaslini · ITChildren's Hospital of Philadelphia · USBGI Group (China) · CNIRCCS Azienda Ospedliero-Universitaria di Bologna Policlinico di Sant'Orsola · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chronic intestinal pseudo-obstruction (CIPO) syndromes are heterogeneous gastrointestinal disorders, caused by either neuropathy or myopathy, resulting in compromised peristalsis and intestinal obstruction. CIPO can have a profound impact on quality of life, leading the most severely affected individuals to life-long parenteral nutrition and urinary catheterization. To search for disease causing gene(s), we performed the whole exome sequencing (WES) in both eight sporadic and two familial cases, followed by targeted sequencing in additional CIPO patients. After identifying a heterozygous missense variant in the ACTG2 gene in one of 10 patients undergone WES, targeted Sanger sequencing of this gene allowed to detect heterozygous missense variants in 9 of 23 further patients with either megacystis-microcolon-intestinal hypoperistalsis syndrome or intestinal pseudo-obstruction. Variants thus identified, one of which still unreported, affect highly conserved regions of the ACTG2 gene that encodes a protein crucial for correct enteric muscle contraction. These findings provided evidence for a correlation between the clinical phenotype and genotype at the ACTG2 locus, a first step to improve the diagnosis and prognosis of these severe conditions.

Indexed as

Mutation, MissenseAbnormalities, MultipleActinsChildColonConserved SequenceExomeFemaleHeterozygoteHumansInfantIntestinal Pseudo-ObstructionMaleUrinary BladderYoung AdultACTG2 protein, humanActins

Identifiers

PMID26813947
PMCPMC4970688
OpenAlexW2473848309

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.