Evidence map›Paper›PMID 26811909›Full record

ArticlePLoS genetics2016

Quantitative Genetics Identifies Cryptic Genetic Variation Involved in the Paternal Regulation of Seed Development.

Nuno D Pires, Marian Bemer, Lena M Müller, Célia Baroux, Charles Spillane, Ueli Grossniklaus

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
8.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Intersexual conflict over seed size is stronger in more outcrossed populations of a mixed-mating plant.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Nuno D PiresDepartment of Plant and Microbial Biology and Zurich-Basel Plant Science Center, University of Zurich, Zürich, Switzerland.
Marian BemerDepartment of Plant and Microbial Biology and Zurich-Basel Plant Science Center, University of Zurich, Zürich, Switzerland.
Lena M MüllerDepartment of Plant and Microbial Biology and Zurich-Basel Plant Science Center, University of Zurich, Zürich, Switzerland.
Célia BarouxDepartment of Plant and Microbial Biology and Zurich-Basel Plant Science Center, University of Zurich, Zürich, Switzerland.
Charles SpillaneDepartment of Plant and Microbial Biology and Zurich-Basel Plant Science Center, University of Zurich, Zürich, Switzerland.
Ueli GrossniklausDepartment of Plant and Microbial Biology and Zurich-Basel Plant Science Center, University of Zurich, Zürich, Switzerland.
University of Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Embryonic development requires a correct balancing of maternal and paternal genetic information. This balance is mediated by genomic imprinting, an epigenetic mechanism that leads to parent-of-origin-dependent gene expression. The parental conflict (or kinship) theory proposes that imprinting can evolve due to a conflict between maternal and paternal alleles over resource allocation during seed development. One assumption of this theory is that paternal alleles can regulate seed growth; however, paternal effects on seed size are often very low or non-existent. We demonstrate that there is a pool of cryptic genetic variation in the paternal control of Arabidopsis thaliana seed development. Such cryptic variation can be exposed in seeds that maternally inherit a medea mutation, suggesting that MEA acts as a maternal buffer of paternal effects. Genetic mapping using recombinant inbred lines, and a novel method for the mapping of parent-of-origin effects using whole-genome sequencing of segregant bulks, indicate that there are at least six loci with small, paternal effects on seed development. Together, our analyses reveal the existence of a pool of hidden genetic variation on the paternal control of seed development that is likely shaped by parental conflict.

Indexed as

Genetic VariationGenomic ImprintingAllelesArabidopsisGene Expression Regulation, PlantGenome, PlantModels, GeneticPlant DevelopmentSeeds

Identifiers

PMID26811909
PMCPMC4727937
OpenAlexW2263670382

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.