Evidence map›Paper›PMID 26811742›Full record

ArticleMedChemComm2016

Arginine-linked neomycin B dimers: synthesis, rRNA binding, and resistance enzyme activity.

Yi Jin, Derrick Watkins, Natalya N Degtyareva, Keith D Green, Meredith N Spano, Sylvie Garneau-Tsodikova, Dev P Arya

Abstract read
In one paragraph

Article in MedChemComm, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.7field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Yi JinClemson University, Department of Chemistry, Clemson, SC, 29634, USA.
Derrick WatkinsNUBAD, LLC, Greenville, SC, 29605, USA.
Natalya N DegtyarevaNUBAD, LLC, Greenville, SC, 29605, USA.
Keith D GreenUniversity of Kentucky, Department of Pharmaceutical Sciences, 789 South Limestone Street, Lexington, KY, 40536-0596, USA. ; Tel: 859-218-1686.
Meredith N SpanoNUBAD, LLC, Greenville, SC, 29605, USA.
Sylvie Garneau-TsodikovaUniversity of Kentucky, Department of Pharmaceutical Sciences, 789 South Limestone Street, Lexington, KY, 40536-0596, USA. ; Tel: 859-218-1686.
Dev P AryaClemson University, Department of Chemistry, Clemson, SC, 29634, USA; NUBAD, LLC, Greenville, SC, 29605, USA.
Nubad (United States) · USUniversity of Kentucky · USClemson University · US

Funding

Novel aminoglycoside adjuvants and stand-alone agents to combat tuberculosisR01AI090048 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI GARNEAU-TSODIKOVA, SYLVIE · 2011 to 2021
$4.4M
A Rapid assay for RNA targeted drugs: Instrumentation SupplementR42GM097917 · NIGMS · NUBAD, LLC · PI ARYA, DEV PRIYA · 2014 to 2015
$1.4M
NIAID NIH HHS R01 AI090048NIGMS NIH HHS R42 GM097917
6 · The paper itself

Abstract

The nucleotides comprising the ribosomal decoding center are highly conserved, as they are important for maintaining translational fidelity. The bacterial A-site has a small base variation as compared with the human analogue, allowing aminoglycoside (AG) antibiotics to selectively bind within this region of the ribosome and negatively affect microbial protein synthesis. Here, by using a fluorescence displacement screening assay, we demonstrate that neomycin B (NEO) dimers connected by L-arginine-containing linkers of varying length and composition bind with higher affinity to model A-site RNAs compared to NEO, with IC

Identifiers

PMID26811742
PMCPMC4722958
OpenAlexW2114070201

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.