Evidence map›Paper›PMID 26811477›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Usp12 stabilizes the T-cell receptor complex at the cell surface during signaling.

Akhee S Jahan, Maxime Lestra, Lee Kim Swee, Ying Fan, Mart M Lamers, Fikadu G Tafesse, Christopher S Theile, Eric Spooner, Roberto Bruzzone, Hidde L Ploegh and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 51 citations in OpenAlex.

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  9. Deubiquitinating Enzyme USP12 Regulates the Pro-Apoptosis Protein Bax.International journal of molecular sciences · 2022
    Article
  10. Review
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  15. USP12 promotes CD4Cell death and differentiation · 2021
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Akhee S JahanHKU-Pasteur Research Pole and Center for Influenza Research, School of Public Health, LKS Faculty of Medicine, University of Hong Kong, Hong Kong;
Maxime LestraHKU-Pasteur Research Pole and Center for Influenza Research, School of Public Health, LKS Faculty of Medicine, University of Hong Kong, Hong Kong;
Lee Kim SweeWhitehead Institute for Biomedical Research, Cambridge, MA 02142;
Ying FanHKU-Pasteur Research Pole and Center for Influenza Research, School of Public Health, LKS Faculty of Medicine, University of Hong Kong, Hong Kong;
Mart M LamersHKU-Pasteur Research Pole and Center for Influenza Research, School of Public Health, LKS Faculty of Medicine, University of Hong Kong, Hong Kong;
Fikadu G TafesseWhitehead Institute for Biomedical Research, Cambridge, MA 02142;
Christopher S TheileWhitehead Institute for Biomedical Research, Cambridge, MA 02142;
Eric SpoonerWhitehead Institute for Biomedical Research, Cambridge, MA 02142;
Roberto BruzzoneHKU-Pasteur Research Pole and Center for Influenza Research, School of Public Health, LKS Faculty of Medicine, University of Hong Kong, Hong Kong; Department of Cell Biology and Infection, Institut Pasteur, 75015 Paris, France;
Hidde L PloeghWhitehead Institute for Biomedical Research, Cambridge, MA 02142; Department of Biology, Massachusetts Institute of Technology, Cambridge, MA 02142.
Sumana SanyalHKU-Pasteur Research Pole and Center for Influenza Research, School of Public Health, LKS Faculty of Medicine, University of Hong Kong, Hong Kong; Department of Cell Biology and Infection, Institut Pasteur, 75015 Paris, France; sanyal@hku.hk.
University of Hong Kong · HKWhitehead Institute for Biomedical Research · USHKU-Pasteur Research Pole · HKMassachusetts Institute of Technology · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Posttranslational modifications are central to the spatial and temporal regulation of protein function. Among others, phosphorylation and ubiquitylation are known to regulate proximal T-cell receptor (TCR) signaling. Here we used a systematic and unbiased approach to uncover deubiquitylating enzymes (DUBs) that participate during TCR signaling in primary mouse T lymphocytes. Using a C-terminally modified vinyl methyl ester variant of ubiquitin (HA-Ub-VME), we captured DUBs that are differentially recruited to the cytosol on TCR activation. We identified ubiquitin-specific peptidase (Usp) 12 and Usp46, which had not been previously described in this pathway. Stimulation with anti-CD3 resulted in phosphorylation and time-dependent translocation of Usp12 from the nucleus to the cytosol. Usp12(-/-) Jurkat cells displayed defective NFκB, NFAT, and MAPK activities owing to attenuated surface expression of TCR, which were rescued on reconstitution of wild type Usp12. Proximity-based labeling with BirA-Usp12 revealed several TCR adaptor proteins acting as interactors in stimulated cells, of which LAT and Trat1 displayed reduced expression in Usp12(-/-) cells. We demonstrate that Usp12 deubiquitylates and prevents lysosomal degradation of LAT and Trat1 to maintain the proximal TCR complex for the duration of signaling. Our approach benefits from the use of activity-based probes in primary cells without any previous genome modification, and underscores the importance of ubiquitin-mediated regulation to refine signaling cascades.

Indexed as

Signal TransductionAnimalsCell MembraneCell NucleusCell SeparationCRISPR-Cas SystemsCytosolEndopeptidasesFatty Acids, UnsaturatedHumansJurkat CellsMiceMitogen-Activated Protein KinasesModels, BiologicalNFATC Transcription FactorsNF-kappa BEndopeptidasesFatty Acids, Unsaturatedleptomycin BMitogen-Activated Protein KinasesNFATC Transcription FactorsNF-kappa BReceptors, Antigen, T-CellUbiquitinubiquitin-specific peptidase 46, humanUbiquitin-Specific ProteasesUbiquitin ThiolesteraseUSP12 protein, humandeubiquitylasesTCR signalingUsp12

Identifiers

PMID26811477
PMCPMC4760780
OpenAlexW2263007618

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.