Evidence map›Paper›PMID 26810657›Full record

ArticleAntimicrobial agents and chemotherapy2016

Fumarate-Mediated Persistence of Escherichia coli against Antibiotics.

Jun-Seob Kim, Da-Hyeong Cho, Paul Heo, Suk-Chae Jung, Myungseo Park, Eun-Joong Oh, Jaeyun Sung, Pan-Jun Kim, Suk-Chan Lee, Dae-Hee Lee and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
6.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
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  8. UNRAVELING CRP/cAMP-MEDIATED METABOLIC REGULATION INbioRxiv : the preprint server for biology · 2025
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  9. Review
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  14. Article
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  16. Article
  17. Ceftazidime-avibactam based combinations against carbapenemase producingComputational and structural biotechnology journal · 2022
    Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 2 countries.

Jun-Seob KimDepartment of Genetic Engineering and Center for Human Interface Nano Technology, Sungkyunkwan University, Suwon, South Korea Department of Food Science and Human Nutrition, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA.
Da-Hyeong ChoDepartment of Genetic Engineering and Center for Human Interface Nano Technology, Sungkyunkwan University, Suwon, South Korea.
Paul HeoDepartment of Genetic Engineering and Center for Human Interface Nano Technology, Sungkyunkwan University, Suwon, South Korea.
Suk-Chae JungDepartment of Genetic Engineering and Center for Human Interface Nano Technology, Sungkyunkwan University, Suwon, South Korea.
Myungseo ParkDepartment of Genetic Engineering and Center for Human Interface Nano Technology, Sungkyunkwan University, Suwon, South Korea.
Eun-Joong OhDepartment of Food Science and Human Nutrition, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA.
Jaeyun SungAsia Pacific Center for Theoretical Physics, Pohang, South Korea.
Pan-Jun KimAsia Pacific Center for Theoretical Physics, Pohang, South Korea Department of Physics, POSTECH, Pohang, South Korea.
Suk-Chan LeeDepartment of Genetic Engineering and Center for Human Interface Nano Technology, Sungkyunkwan University, Suwon, South Korea.
Dae-Hee LeeBiochemicals and Synthetic Biology Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, South Korea.
Sarah LeeDepartment of Bioscience and Biotechnology, Konkuk University, Seoul, South Korea.
Choong Hwan LeeDepartment of Bioscience and Biotechnology, Konkuk University, Seoul, South Korea.
Dongwoo ShinDepartment of Molecular Cell Biology, Sungkyunkwan University School of Medicine, Suwon, South Korea.
Yong-Su JinDepartment of Food Science and Human Nutrition, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA ysjin@illinois.edu dhkweon@skku.edu.
Dae-Hyuk KweonDepartment of Genetic Engineering and Center for Human Interface Nano Technology, Sungkyunkwan University, Suwon, South Korea ysjin@illinois.edu dhkweon@skku.edu.
Sungkyunkwan University · KRUniversity of Illinois Urbana-Champaign · USAsia Pacific Center for Theoretical Physics · KRKonkuk University · KRKorea Research Institute of Bioscience and Biotechnology · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial persisters are a small fraction of quiescent cells that survive in the presence of lethal concentrations of antibiotics. They can regrow to give rise to a new population that has the same vulnerability to the antibiotics as did the parental population. Although formation of bacterial persisters in the presence of various antibiotics has been documented, the molecular mechanisms by which these persisters tolerate the antibiotics are still controversial. We found that amplification of the fumarate reductase operon (FRD) inEscherichia coliled to a higher frequency of persister formation. The persister frequency ofE. coliwas increased when the cells contained elevated levels of intracellular fumarate. Genetic perturbations of the electron transport chain (ETC), a metabolite supplementation assay, and even the toxin-antitoxin-relatedhipA7mutation indicated that surplus fumarate markedly elevated theE. colipersister frequency. AnE. colistrain lacking succinate dehydrogenase (SDH), thereby showing a lower intracellular fumarate concentration, was killed ∼1,000-fold more effectively than the wild-type strain in the stationary phase. It appears thatSDHandFRDrepresent a paired system that gives rise to and maintainsE. colipersisters by producing and utilizing fumarate, respectively.

Indexed as

Gene Expression Regulation, BacterialAmpicillinAnti-Bacterial AgentsBacterial ProteinsCitric Acid CycleDrug Resistance, Multiple, BacterialElectron TransportEscherichia coliFumaratesGene Expression ProfilingGene LibraryKanamycinMicrobial Sensitivity TestsNorfloxacinOperonSuccinate DehydrogenaseAmpicillinAnti-Bacterial AgentsBacterial ProteinsFumaratesfumaric acidKanamycinNorfloxacinSuccinate Dehydrogenase

Identifiers

PMID26810657
PMCPMC4808198
OpenAlexW2273414649

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.