Evidence map›Paper›PMID 26809558›Full record

ArticleJournal of experimental botany2016

Mg chelatase in chlorophyll synthesis and retrograde signaling in Chlamydomonas reinhardtii: CHLI2 cannot substitute for CHLI1.

Pawel Brzezowski, Marina N Sharifi, Rachel M Dent, Marius K Morhard, Krishna K Niyogi, Bernhard Grimm

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 31 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Pawel BrzezowskiInstitute of Biology/Plant Physiology, Humboldt University, Philippstraße 13, D-10115 Berlin, Germany.
Marina N SharifiDepartment of Plant and Microbial Biology, Howard Hughes Medical Institute, University of California, Berkeley, CA 94720-3102, USA Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Rachel M DentDepartment of Plant and Microbial Biology, Howard Hughes Medical Institute, University of California, Berkeley, CA 94720-3102, USA Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Marius K MorhardInstitute of Biology/Plant Physiology, Humboldt University, Philippstraße 13, D-10115 Berlin, Germany.
Krishna K NiyogiDepartment of Plant and Microbial Biology, Howard Hughes Medical Institute, University of California, Berkeley, CA 94720-3102, USA Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Bernhard GrimmInstitute of Biology/Plant Physiology, Humboldt University, Philippstraße 13, D-10115 Berlin, Germany bernhard.grimm@rz.hu-berlin.de.
Humboldt-Universität zu Berlin · DEHoward Hughes Medical Institute · USLawrence Berkeley National Laboratory · USUniversity of California, Berkeley · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The oligomeric Mg chelatase (MgCh), consisting of the subunits CHLH, CHLI, and CHLD, is located at the central site of chlorophyll synthesis, but is also thought to have an additional function in regulatory feedback control of the tetrapyrrole biosynthesis pathway and in chloroplast retrograde signaling. In Arabidopsis thaliana and Chlamydomonas reinhardtii, two genes have been proposed to encode the CHLI subunit of MgCh. While the role of CHLI1 in A. thaliana MgCh has been substantially elucidated, different reports provide inconsistent results with regard to the function of CHLI2 in Mg chelation and retrograde signaling. In the present report, the possible functions of both isoforms were analyzed in C. reinhardtii Knockout of the CHLI1 gene resulted in complete loss of MgCh activity, absence of chlorophyll, acute light sensitivity, and, as a consequence, down-regulation of tetrapyrrole biosynthesis and photosynthesis-associated nuclear genes. These observations indicate a phenotypical resemblance of chli1 to the chlh and chld C. reinhardtii mutants previously reported. The key role of CHLI1 for MgCh reaction in comparison with the second isoform was confirmed by the rescue of chli1 with genomic CHLI1 Because CHLI2 in C. reinhardtii shows lower expression than CHLI1, strains overexpressing CHLI2 were produced in the chli1 background. However, no complementation of the chli1 phenotype was observed. Silencing of CHLI2 in the wild-type background did not result in any changes in the accumulation of tetrapyrrole intermediates or of chlorophyll. The results suggest that, unlike in A. thaliana, changes in CHLI2 content observed in the present studies do not affect formation and activity of MgCh in C. reinhardtii.

Indexed as

Signal TransductionAlgal ProteinsChlamydomonas reinhardtiiChlorophyllDown-RegulationLyasesPhylogenySequence Analysis, DNATetrapyrrolesAlgal ProteinsChlorophyllLyasesmagnesium chelataseTetrapyrrolesChlamydomonasCHLIchloroplast retrograde signalingMg chelataseprotoporphyrin IXtetrapyrrole biosynthesis pathway.

Identifiers

PMID26809558
PMCPMC4915523
OpenAlexW2343421584

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.