Evidence map›Paper›PMID 26809501›Full record

ArticleMolecular oncology2016

Integrated analysis of the prostate cancer small-nucleolar transcriptome reveals SNORA55 as a driver of prostate cancer progression.

Francesco Crea, Luca Quagliata, Agnieszka Michael, Hui Hsuan Liu, Paolo Frumento, Arun A Azad, Hui Xue, Larissa Pikor, Akira Watahiki, Rudolf Morant and 10 more

Open access · hybridAbstract read
In one paragraph

Article in Molecular oncology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 1 synthesis or guideline pooled it, 75 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Small nucleolar RNAs: the hidden precursors of cancer ribosomes.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
  7. Review
  8. GL4SDA: Predicting snoRNA-disease associations using GNNs and LLM embeddings.Computational and structural biotechnology journal · 2025
    Article
  9. Article
  10. NewmedRxiv : the preprint server for health sciences · 2024
    Article
  11. Review
  12. SnoRNAs: Exploring Their Implication in Human Diseases.International journal of molecular sciences · 2024
    Review
  13. Article
  14. Review
  15. SNORA5A regulates tumor-associated macrophage M1/M2 phenotypes via TRAF3IP3 in breast cancer.Brazilian journal of medical and biological research = Revista brasileira de pesquisas medicas e biologica · 2024
    Article
  16. Review
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 5 institutions in 5 countries.

Francesco CreaExperimental Therapeutics, BC Cancer Agency Cancer Research Centre, Vancouver BC, Canada; The Vancouver Prostate Centre & Department of Urologic Sciences, University of British Columbia, Vancouver BC, Canada; Department of Life, Health, and Chemical Sciences, The Open University, Milton Keynes, UK.
Luca QuagliataMolecular Pathology Unit, Institute of Pathology University Hospital Basel, Switzerland.
Agnieszka MichaelOncology, FHMS, School of Biosciences and Medicine, University of Surrey, UK.
Hui Hsuan LiuExperimental Therapeutics, BC Cancer Agency Cancer Research Centre, Vancouver BC, Canada.
Paolo FrumentoKarolinska Institutet, Institute of Environmental Medicine, Unit of Biostatistics, Stockholm, Sweden.
Arun A AzadMedical Oncology, BC Cancer Agency Vancouver Cancer Centre, Vancouver BC, Canada.
Hui XueExperimental Therapeutics, BC Cancer Agency Cancer Research Centre, Vancouver BC, Canada.
Larissa PikorGenetics Unit, Integrative Oncology, BC Cancer Agency Cancer Research Centre, Vancouver BC, Canada.
Akira WatahikiExperimental Therapeutics, BC Cancer Agency Cancer Research Centre, Vancouver BC, Canada; The Vancouver Prostate Centre & Department of Urologic Sciences, University of British Columbia, Vancouver BC, Canada.
Rudolf MorantCancer Center ZeTuP AG St.Gallen, St.Gallen, Switzerland.
Serenella Eppenberger-CastoriMolecular Pathology Unit, Institute of Pathology University Hospital Basel, Switzerland.
Yuwei WangExperimental Therapeutics, BC Cancer Agency Cancer Research Centre, Vancouver BC, Canada.
Abhijit ParoliaExperimental Therapeutics, BC Cancer Agency Cancer Research Centre, Vancouver BC, Canada.
Kim A LennoxIntegrated DNA Technologies, Coralville, IA, USA.
Wan L LamGenetics Unit, Integrative Oncology, BC Cancer Agency Cancer Research Centre, Vancouver BC, Canada.
Martin GleaveThe Vancouver Prostate Centre & Department of Urologic Sciences, University of British Columbia, Vancouver BC, Canada.
Kim N ChiThe Vancouver Prostate Centre & Department of Urologic Sciences, University of British Columbia, Vancouver BC, Canada; Medical Oncology, BC Cancer Agency Vancouver Cancer Centre, Vancouver BC, Canada.
Hardev PandhaOncology, FHMS, School of Biosciences and Medicine, University of Surrey, UK.
Yuzhuo WangExperimental Therapeutics, BC Cancer Agency Cancer Research Centre, Vancouver BC, Canada; The Vancouver Prostate Centre & Department of Urologic Sciences, University of British Columbia, Vancouver BC, Canada. Electronic address: ywang@bccrc.ca.
Cheryl D HelgasonExperimental Therapeutics, BC Cancer Agency Cancer Research Centre, Vancouver BC, Canada. Electronic address: chelgaso@bccrc.ca.
BC Cancer Agency · CAUniversity Hospital of Basel · CHKarolinska Institutet · SETumor- und Brustzentrum ZeTuP Silberturm · CHUniversity of Surrey · GB

Funding

CIHR
6 · The paper itself

Abstract

Metastasis is the primary cause of death in prostate cancer (PCa) patients. Small nucleolar RNAs (snoRNAs) have long been considered "housekeeping" genes with no relevance for cancer biology. Emerging evidence has challenged this assumption, suggesting that snoRNA expression is frequently modulated during cancer progression. Despite this, no study has systematically addressed the prognostic and functional significance of snoRNAs in PCa. We performed RNA Sequencing on paired metastatic/non-metastatic PCa xenografts derived from clinical specimens. The clinical significance of differentially expressed snoRNAs was further investigated in two independent primary PCa cohorts (131 and 43 patients, respectively). The snoRNA demonstrating the strongest association with clinical outcome was quantified in PCa patient-derived serum samples and its functional relevance was investigated in PCa cells via gene expression profiling, pathway analysis and gene silencing. Our comparison revealed 21 differentially expressed snoRNAs in the metastatic vs. non-metastatic xenografts. Of those, 12 were represented in clinical databases and were further analyzed. SNORA55 emerged as a predictor of shorter relapse-free survival (results confirmed in two independent databases). SNORA55 was reproducibly detectable in serum samples from PCa patients. SNORA55 silencing in PCa cell lines significantly inhibited cell proliferation and migration. Pathway analysis revealed that SNORA55 expression is significantly associated with growth factor signaling and pro-inflammatory cytokine expression in PCa. Our results demonstrate that SNORA55 up-regulation predicts PCa progression and that silencing this non-coding gene affects PCa cell proliferation and metastatic potential, thus positioning it as both a novel biomarker and therapeutic target.

Indexed as

Gene Expression Regulation, NeoplasticTranscriptomeAgedCell Line, TumorDisease ProgressionGene Expression ProfilingHumansMaleMiddle AgedProstateProstatic NeoplasmsRNA, Small NucleolarUp-RegulationRNA, Small NucleolarAntisense oligonucleotideNext generation sequencingNon-coding RNAsPatient-derived xenograftProstate cancerSNORA55

Identifiers

PMID26809501
PMCPMC5423162
OpenAlexW2216300105

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.