Evidence map›Paper›PMID 26807968›Full record

ArticleAIDS (London, England)2016

Treatment options after virological failure of first-line tenofovir-based regimens in South Africa: an analysis by deep sequencing.

Maria Casadellà, Marc Noguera-Julian, Henry Sunpath, Michelle Gordon, Cristina Rodriguez, Mariona Parera, Daniel R Kuritzkes, Vincent C Marconi, Roger Paredes

Abstract read
In one paragraph

Article in AIDS (London, England), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
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  5. Observational
  6. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Maria CasadellàaIrsiCaixa AIDS Research Institute, Universitat Autònoma de Barcelona, Badalona, Catalonia bUniversitat de Vic-Central de Catalunya, Vic, Spain cMcCord Hospital dUniversity of KwaZulu-Natal eNelson Mandela School of Medicine, Durban, South Africa fDivision of Infectious Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts gRollins School of Public Health, Emory University hEmory University School of Medicine, Atlanta, Georgia, USA iHIV Unit, Hospital Universitari Germans Trias i Pujol, Badalona, Catalonia, Spain.
Marc Noguera-Julian
Henry Sunpath
Michelle Gordon
Cristina Rodriguez
Mariona Parera
Daniel R Kuritzkes
Vincent C Marconi
Roger Paredes

Funding

Implementing a Maternal health and PRegnancy Outcomes Vision for Everyone (IMPROVE)UL1TR002378 · NCATS · EMORY UNIVERSITY · PI Andres J Garcia, Elizabeth O. Ofili · 2017 to 2026
$92.1M
Virology and Molecular Biomarkers CoreP30AI050409 · NIAID · EMORY UNIVERSITY · PI Carlos del Rio · 2002 to 2026
$74.0M
CTSA INFRASTRUCTURE FOR PEDIATRIC RESEARCHUL1RR025008 · NCRR · EMORY UNIVERSITY · PI STEPHENS, DAVID S · 2007 to 2011
$29.0M
Antiretroviral drug resistance in KwaZulu NatalR01AI098558 · NIAID · BRIGHAM AND WOMEN'S HOSPITAL · PI KURITZKES, DANIEL R., MARCONI, VINCENT CHARLES · 2013 to 2017
$2.3M
NCATS NIH HHS UL1 TR002378NCRR NIH HHS UL1 RR025008NCRR NIH HHS UL1RR025008NIAID NIH HHS P30 AI050409NIAID NIH HHS P30AI050409NIAID NIH HHS R01 AI098558NIAID NIH HHS R01 AI098558-01A1
6 · The paper itself

Abstract

In a South African cohort of participants living with HIV developing virological failure on first-line tenofovir disoproxyl fumarate (TDF)-based regimens, at least 70% of participants demonstrated TDF resistance according to combined Sanger and MiSeq genotyping. Sanger sequencing missed the K65R mutation in 30% of samples. Unless HIV genotyping is available to closely monitor epidemiological HIV resistance to TDF, its efficacy as second-line therapy will be greatly compromised.

Indexed as

Drug Resistance, ViralHigh-Throughput Nucleotide SequencingAnti-HIV AgentsAntiretroviral Therapy, Highly ActiveGenotypeGenotyping TechniquesHIVHIV InfectionsHumansMicrobial Sensitivity TestsSouth AfricaTenofovirTreatment FailureAnti-HIV AgentsTenofovir

Identifiers

PMID26807968
PMCPMC5884087

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.