Evidence map›Paper›PMID 26807608›Full record

ArticleAmerican journal of respiratory cell and molecular biology2016

Molecular Analysis of Sarcoidosis Granulomas Reveals Antimicrobial Targets.

Joseph E Rotsinger, Lindsay J Celada, Vasiliy V Polosukhin, James B Atkinson, Wonder P Drake

Open access · greenAbstract read
In one paragraph

Article in American journal of respiratory cell and molecular biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 35 citations in OpenAlex.

  1. Review
  2. Review
  3. Cellular Recycling Gone Wrong: The Role of Dysregulated Autophagy and Hyperactive mTORC1 in the Pathogenesis of Sarcoidosis.Sarcoidosis, vasculitis, and diffuse lung diseases : official journal of WASOG · 2023
    Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. The Role ofMicroorganisms · 2022
    Review
  9. Article
  10. Immunohistochemical Detection ofMicroorganisms · 2021
    Article
  11. Review
  12. The Great Italian Masquerade.Journal of community hospital internal medicine perspectives · 2021
    Article
  13. Review
  14. Article
  15. Review
  16. Environmental Risk Factors for Sarcoidosis.Frontiers in immunology · 2020
    Review
  17. Environment, Epigenetics, and Differential Responses to Beryllium Exposure: Are We There Yet?American journal of respiratory cell and molecular biology · 2019
    Article
  18. Potential immunotherapies for sarcoidosis.Expert opinion on biological therapy · 2018
    Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Joseph E Rotsinger1 Divisions of Infectious Diseases and.ORCID 0000-0002-5046-2102
Lindsay J Celada1 Divisions of Infectious Diseases and.
Vasiliy V Polosukhin2 Allergy, Pulmonary, and Critical Care Medicine, Department of Medicine, and.
James B Atkinson3 Department of Pathology, Microbiology and Immunology, Vanderbilt University School of Medicine, Nashville, Tennessee.
Wonder P Drake1 Divisions of Infectious Diseases and.
Office of Infectious Diseases · USVanderbilt University · USPulmonary and Allergy Associates · US

Funding

Microbial induction of sarcoidosis CD4+ T cell dysfunctionR01HL117074 · NHLBI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI BERNARD, GORDON RAPHAEL, DRAKE, WONDER P. · 2013 to 2017
$3.8M
Investigation of the role of bacteria in the sarcoidosis trimolecular complexR01HL083839 · NHLBI · VANDERBILT UNIVERSITY · PI DRAKE, WONDER P. · 2006 to 2009
$1.5M
Mentoring in Translational Research in Interstitial Lung DiseasesK24HL127301 · NHLBI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Wonder P. Drake · 2016 to 2026
$1.2M
NHLBI NIH HHS K24 HL127301NHLBI NIH HHS R01 HL083839NHLBI NIH HHS R01 HL117074
6 · The paper itself

Abstract

Sarcoidosis is a granulomatous disease of unknown cause. Prior molecular and immunologic studies have confirmed the presence of mycobacterial virulence factors, such as catalase peroxidase and superoxide dismutase A, within sarcoidosis granulomas. Molecular analysis of granulomas can identify targets of known antibiotics classes. Currently, major antibiotics are directed against DNA synthesis, protein synthesis, and cell wall formation. We conducted molecular analysis of 40 sarcoidosis diagnostic specimens and compared them with 33 disease control specimens for the presence of mycobacterial genes that encode antibiotic targets. We assessed for genes involved in DNA synthesis (DNA gyrase A [gyrA] and DNA gyrase B), protein synthesis (RNA polymerase subunit β), cell wall synthesis (embCAB operon and enoyl reductase), and catalase peroxidase. Immunohistochemical analysis was conducted to investigate the locale of mycobacterial genes such as gyrA within 12 sarcoidosis specimens and 12 disease controls. Mycobacterial DNA was detected in 33 of 39 sarcoidosis specimens by quantitative real-time polymerase chain reaction compared with 2 of 30 disease control specimens (P < 0.001, two-tailed Fisher's test). Twenty of 39 were positive for three or more mycobacterial genes, compared with 1 of 30 control specimens (P < 0.001, two-tailed Fisher's test). Immunohistochemistry analysis localized mycobacterial gyrA nucleic acids to sites of granuloma formation in 9 of 12 sarcoidosis specimens compared with 1 of 12 disease controls (P < 0.01). Microbial genes encoding enzymes that can be targeted by currently available antimycobacterial antibiotics are present in sarcoidosis specimens and localize to sites of granulomatous inflammation. Use of antimicrobials directed against target enzymes may be an innovative treatment alternative.

Indexed as

Molecular Targeted TherapyAdolescentAdultAgedAnti-Infective AgentsCase-Control StudiesDemographyDNA, BacterialFemaleGranulomaHumansIn Situ HybridizationMaleMiddle AgedMycobacteriumReal-Time Polymerase Chain ReactionAnti-Infective AgentsDNA, Bacterialazithromycinethambutollevofloxacinrifampinsarcoidosis

Identifiers

PMID26807608
PMCPMC4942207
OpenAlexW2270697365

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.