Evidence map›Paper›PMID 26806422›Full record

ArticleJournal of veterinary internal medicine

Use of Serial Quantitative PCR of the vapA Gene of Rhodococcus equi in Feces for Early Detection of R. equi Pneumonia in Foals.

R G Madrigal, S D Shaw, L A Witkowski, B E Sisson, G P Blodgett, M K Chaffin, N D Cohen

Open access · goldAbstract read
In one paragraph

Article in Journal of veterinary internal medicine. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Less Typical Courses ofVeterinary sciences · 2022
    Article
  7. Novel Quantitative PCR forAnimals : an open access journal from MDPI · 2022
    Article
  8. Article
  9. Article
  10. Current Trends in Understanding and Managing Equine Rhodococcosis.Animals : an open access journal from MDPI · 2020
    Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

R G MadrigalDepartment of Large Animal Clinical Sciences, College of Biomedical Sciences and Veterinary Medicine, Texas A&M University, College Station, TX.
S D ShawDepartment of Large Animal Clinical Sciences, College of Biomedical Sciences and Veterinary Medicine, Texas A&M University, College Station, TX.
L A WitkowskiLaboratory of Veterinary Epidemiology and Economics, Faculty of Veterinary Medicine, Warsaw University of Life Sciences, Warsaw, Poland.
B E SissonDepartment of Large Animal Clinical Sciences, College of Biomedical Sciences and Veterinary Medicine, Texas A&M University, College Station, TX.
G P BlodgettEquine Division, 6666 Ranch, Guthrie, TX.
M K ChaffinDepartment of Large Animal Clinical Sciences, College of Biomedical Sciences and Veterinary Medicine, Texas A&M University, College Station, TX.
N D CohenDepartment of Large Animal Clinical Sciences, College of Biomedical Sciences and Veterinary Medicine, Texas A&M University, College Station, TX.
Texas College · USJapan Racing Association · JPWarsaw University of Life Sciences · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCurrent screening tests for Rhodococcus equi pneumonia in foals lack adequate accuracy for clinical use. Real-time, quantitative PCR (qPCR) for virulent R. equi in feces has not been systematically evaluated as a screening test.

objectiveThe objective of this study was to evaluate the accuracy of qPCR for vapA in serially collected fecal samples as a screening test for R. equi pneumonia in foals. ANIMALS: One hundred and twenty-five foals born in 2011 at a ranch in Texas.

methodsFecal samples were collected concurrently with thoracic ultrasonography (TUS) screening examinations at ages 3, 5, and 7 weeks. Affected (pneumonic) foals (n = 25) were matched by age and date-of-birth to unaffected (n = 25) and subclinical (ie, having thoracic TUS lesions but no clinical signs of pneumonia) foals (n = 75). DNA was extracted from feces using commercial kits and concentration of virulent R. equi in feces was determined by qPCR.

resultsSubsequently affected foals had significantly greater concentrations of vapA in feces than foals that did not develop pneumonia (unaffected and subclinical foals) at 5 and 7 weeks of age. Accuracy of fecal qPCR, however, was poor as a screening test to differentiate foals that would develop clinical signs of pneumonia from those that would remain free of clinical signs (including foals with subclinical pulmonary lesions attributed to R. equi) using receiver operating characteristic (ROC) methods. CONCLUSIONS AND CLINICAL IMPORTANCE: In the population studied, serial qPCR on feces lacked adequate accuracy as a screening test for clinical R. equi foal pneumonia.

Indexed as

Actinomycetales InfectionsAnimalsBacterial ProteinsFecesHorse DiseasesHorsesPneumonia, BacterialPolymerase Chain ReactionRhodococcus equiSensitivity and SpecificityBacterial ProteinsVapA protein, Rhodococcus equiFecesHorsePneumoniaRhodococcus equi

Identifiers

PMID26806422
PMCPMC4913589
OpenAlexW2313209315

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.