Evidence map›Paper›PMID 26805856›Full record

ArticleMarine drugs2016

Liquid Chromatography-Mass Spectrometry-Based Rapid Secondary-Metabolite Profiling of Marine Pseudoalteromonas sp. M2.

Woo Jung Kim, Young Ok Kim, Jin Hee Kim, Bo-Hye Nam, Dong-Gyun Kim, Cheul Min An, Jun Sik Lee, Pan Soo Kim, Hye Min Lee, Joa-Sup Oh and 1 more

Open access · goldAbstract read
In one paragraph

Article in Marine drugs, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.7field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 35 citations in OpenAlex.

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  13. Bioactive Compounds ofPolish journal of microbiology · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Woo Jung KimBiocenter, Gyeonggi Institute of Science and Technology Promotion (GSTEP), Suwon, Gyeonggi-do 16229, Korea. wj0504@gstep.re.kr.
Young Ok KimBiotechnology Research Division, National Fisheries Research and Development Institute (NFRDI), Gijang-gun, Busan 46083, Korea. yobest12@korea.kr.
Jin Hee KimCollege of Herbal Bio-Industry, Daegu Haany University, Gyeongsan, Gyeongbuk 42158, Korea. jinheekim@dhu.ac.kr.
Bo-Hye NamBiotechnology Research Division, National Fisheries Research and Development Institute (NFRDI), Gijang-gun, Busan 46083, Korea. nambohye@korea.kr.
Dong-Gyun KimBiotechnology Research Division, National Fisheries Research and Development Institute (NFRDI), Gijang-gun, Busan 46083, Korea. combikola@korea.kr.
Cheul Min AnBiotechnology Research Division, National Fisheries Research and Development Institute (NFRDI), Gijang-gun, Busan 46083, Korea. ancm@korea.kr.
Jun Sik LeeDepartment of Biology, Immunology Research Lab, BK21-plus Research Team for Bioactive Control Technology, College of Natural Sciences, Chosun University, Dong-gu, Gwangju 61452, Korea. junsiklee@chosun.ac.kr.
Pan Soo KimBiocenter, Gyeonggi Institute of Science and Technology Promotion (GSTEP), Suwon, Gyeonggi-do 16229, Korea. pan@gstep.re.kr.
Hye Min LeeBiocenter, Gyeonggi Institute of Science and Technology Promotion (GSTEP), Suwon, Gyeonggi-do 16229, Korea. hmlee@gstep.re.kr.
Joa-Sup OhBiocenter, Gyeonggi Institute of Science and Technology Promotion (GSTEP), Suwon, Gyeonggi-do 16229, Korea. jsoh@gstep.re.kr.
Jong Suk LeeBiocenter, Gyeonggi Institute of Science and Technology Promotion (GSTEP), Suwon, Gyeonggi-do 16229, Korea. jslee@gstep.re.kr.
Chosun University · KRGyeonggi College of Science and Technology · KRNational Institute of Fisheries Science · KRDaegu Haany University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ocean is a rich resource of flora, fauna, and food. A wild-type bacterial strain showing confluent growth on marine agar with antibacterial activity was isolated from marine water, identified using 16S rDNA sequence analysis as Pseudoalteromonas sp., and designated as strain M2. This strain was found to produce various secondary metabolites including quinolone alkaloids. Using high-resolution mass spectrometry (MS) and nuclear magnetic resonance (NMR) analysis, we identified nine secondary metabolites of 4-hydroxy-2-alkylquinoline (pseudane-III, IV, V, VI, VII, VIII, IX, X, and XI). Additionally, this strain produced two novel, closely related compounds, 2-isopentylqunoline-4-one and 2-(2,3-dimetylbutyl)qunoline-4-(1H)-one, which have not been previously reported from marine bacteria. From the metabolites produced by Pseudoalteromonas sp. M2, 2-(2,3-dimethylbutyl)quinolin-4-one, pseudane-VI, and pseudane-VII inhibited melanin synthesis in Melan-A cells by 23.0%, 28.2%, and 42.7%, respectively, wherein pseudane-VII showed the highest inhibition at 8 µg/mL. The results of this study suggest that liquid chromatography (LC)-MS/MS-based metabolite screening effectively improves the efficiency of novel metabolite discovery. Additionally, these compounds are promising candidates for further bioactivity development.

Indexed as

PseudoalteromonasAnti-Bacterial AgentsChromatography, LiquidHumansSeawaterTandem Mass SpectrometryAnti-Bacterial Agentsmarine microbesmass spectrometryPseudoalteromonasquinolone alkaloidsecondary metabolite

Identifiers

PMID26805856
PMCPMC4728520
OpenAlexW2272503628

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.