Evidence map›Paper›PMID 26804569›Full record

ArticleJournal of molecular biology2016

Structures of the DfsB Protein Family Suggest a Cationic, Helical Sibling Lethal Factor Peptide.

Jonathan D Taylor, Gabrielle Taylor, Stephen A Hare, Steve J Matthews

Abstract read
In one paragraph

Article in Journal of molecular biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jonathan D TaylorDepartment of Life Sciences, Imperial College London, London SW7 2AZ, United Kingdom.
Gabrielle TaylorDepartment of Life Sciences, Imperial College London, London SW7 2AZ, United Kingdom.
Stephen A HareDepartment of Life Sciences, Imperial College London, London SW7 2AZ, United Kingdom.
Steve J MatthewsDepartment of Life Sciences, Imperial College London, London SW7 2AZ, United Kingdom. Electronic address: s.j.matthews@imperial.ac.uk.

Funding

Medical Research Council G1001664Medical Research Council MR/J006874/1Wellcome Trust 100280Wellcome Trust 104833Wellcome Trust 104933
6 · The paper itself

Abstract

Bacteria have developed a variety of mechanisms for surviving harsh environmental conditions, nutrient stress and overpopulation. Paenibacillus dendritiformis produces a lethal protein (Slf) that is able to induce cell death in neighbouring colonies and a phenotypic switch in more distant ones. Slf is derived from the secreted precursor protein, DfsB, after proteolytic processing. Here, we present new crystal structures of DfsB homologues from a variety of bacterial species and a surprising version present in the yeast Saccharomyces cerevisiae. Adopting a four-helix bundle decorated with a further three short helices within intervening loops, DfsB belongs to a non-enzymatic class of the DinB fold. The structure suggests that the biologically active Slf fragment may possess a C-terminal helix rich in basic and aromatic residues that suggest a functional mechanism akin to that for cationic antimicrobial peptides.

Indexed as

BacteriaBacteriocinsCrystallography, X-RayModels, MolecularPaenibacillusProtein Structure, SecondarySaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsBacteriocinsIRC4 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsbacteriocinDfsBFratricidepatterningsporulation

Identifiers

PMID26804569
PMCPMC4773401

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.