Evidence map›Paper›PMID 26804021›Full record

ArticleNature communications2016

Shugoshin forms a specialized chromatin domain at subtelomeres that regulates transcription and replication timing.

Sanki Tashiro, Tetsuya Handa, Atsushi Matsuda, Takuto Ban, Toru Takigawa, Kazumi Miyasato, Kojiro Ishii, Kazuto Kugou, Kunihiro Ohta, Yasushi Hiraoka and 2 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 52 citations in OpenAlex.

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  19. Subtelomeric Transcription and its Regulation.Journal of molecular biology · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Sanki TashiroInstitute for Protein Research, Osaka University, 3-2 Yamadaoka, Suita, Osaka 565-0871, Japan.
Tetsuya HandaDepartment of Biological Sciences, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan.
Atsushi MatsudaAdvanced ICT Research Institute Kobe, National Institute of Information and Communications Technology, Kobe, Hyogo 651-2492, Japan.
Takuto BanInstitute for Protein Research, Osaka University, 3-2 Yamadaoka, Suita, Osaka 565-0871, Japan.
Toru TakigawaDepartment of Biological Sciences, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan.
Kazumi MiyasatoInstitute for Protein Research, Osaka University, 3-2 Yamadaoka, Suita, Osaka 565-0871, Japan.
Kojiro IshiiGraduate School of Frontier Biosciences, Osaka University, Suita, Osaka 565-0871, Japan.
Kazuto KugouDepartment of Life Sciences, The University of Tokyo, Meguro-ku, Tokyo 153-8902, Japan.
Kunihiro OhtaDepartment of Life Sciences, The University of Tokyo, Meguro-ku, Tokyo 153-8902, Japan.
Yasushi HiraokaAdvanced ICT Research Institute Kobe, National Institute of Information and Communications Technology, Kobe, Hyogo 651-2492, Japan.ORCID http://orcid.org/0000-0001-9407-8228
Hisao MasukataDepartment of Biological Sciences, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan.
Junko KanohInstitute for Protein Research, Osaka University, 3-2 Yamadaoka, Suita, Osaka 565-0871, Japan.
The University of Osaka · JPNational Institute of Information and Communications Technology · JPThe University of Tokyo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A chromosome is composed of structurally and functionally distinct domains. However, the molecular mechanisms underlying the formation of chromatin structure and the function of subtelomeres, the telomere-adjacent regions, remain obscure. Here we report the roles of the conserved centromeric protein Shugoshin 2 (Sgo2) in defining chromatin structure and functions of the subtelomeres in the fission yeast Schizosaccharomyces pombe. We show that Sgo2 localizes at the subtelomeres preferentially during G2 phase and is essential for the formation of a highly condensed subtelomeric chromatin body 'knob'. Furthermore, the absence of Sgo2 leads to the derepression of the subtelomeric genes and premature DNA replication at the subtelomeric late origins. Thus, the subtelomeric specialized chromatin domain organized by Sgo2 represses both transcription and replication to ensure proper gene expression and replication timing.

Indexed as

DNA Replication TimingChromatinChromosomal Proteins, Non-HistoneG2 PhaseProtein Structure, TertiaryProtein TransportSchizosaccharomycesSchizosaccharomyces pombe ProteinsTelomereTranscription, GeneticChromatinChromosomal Proteins, Non-HistoneSchizosaccharomyces pombe ProteinsSgo2 protein, S pombe

Identifiers

PMID26804021
PMCPMC4737732
OpenAlexW2264511039

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.