Evidence map›Paper›PMID 26800519›Full record

ArticlePloS one2016

Expression of the Long Non-Coding RNA HOTAIR Correlates with Disease Progression in Bladder Cancer and Is Contained in Bladder Cancer Patient Urinary Exosomes.

Claudia Berrondo, Jonathan Flax, Victor Kucherov, Aisha Siebert, Thomas Osinski, Alex Rosenberg, Christopher Fucile, Samuel Richheimer, Carla J Beckham

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 164 papers.

0numbers the graph read from it
0cells of the map it votes in
164citing papers in PubMed
15.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

164 citing papers in PubMed, 274 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Review
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  7. Review
  8. Bladder cancer: non-coding RNAs and exosomal non-coding RNAs.Functional & integrative genomics · 2024
    Review
  9. Review
  10. Review
  11. Review
  12. Relevance ofCancers · 2024
    Article
  13. Review
  14. Review
  15. Article
  16. International journal of molecular sciences · 2023
    Review
  17. Review
  18. Roles of exosome-derived non-coding RNA in tumor micro-environment and its clinical application.Zhejiang da xue xue bao. Yi xue ban = Journal of Zhejiang University. Medical sciences · 2023
    Review
  19. Review
  20. Review

104 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Claudia BerrondoUniversity of Rochester Department of Urology, Strong Memorial Hospital Rochester, New York, United States of America.
Jonathan FlaxUniversity of Rochester Department of Urology, Strong Memorial Hospital Rochester, New York, United States of America.
Victor KucherovUniversity of Rochester School of Medicine and Dentistry, Rochester, New York, United States of America.
Aisha SiebertUniversity of Rochester School of Medicine and Dentistry, Rochester, New York, United States of America.
Thomas OsinskiUniversity of Rochester School of Medicine and Dentistry, Rochester, New York, United States of America.
Alex RosenbergDivision of Immunology and Rheumatology, University of Rochester, Strong Memorial Hospital Rochester, New York, United States of America.
Christopher FucileDivision of Immunology and Rheumatology, University of Rochester, Strong Memorial Hospital Rochester, New York, United States of America.
Samuel RichheimerUniversity of Rochester Department of Urology, Strong Memorial Hospital Rochester, New York, United States of America.
Carla J BeckhamUniversity of Rochester Department of Urology, Strong Memorial Hospital Rochester, New York, United States of America.
University of Rochester · USStrong Memorial Hospital · US

Funding

The University of Rochester's Clinical and Translational Science InstituteUL1TR000042 · NCATS · UNIVERSITY OF ROCHESTER · PI BENNETT, NANCY M, KIEBURTZ, KARL D. · 2012 to 2015
$14.4M
NCATS NIH HHS 5UL1TR000042-09NCATS NIH HHS UL1 TR000042
6 · The paper itself

Abstract

Exosomes are 30-150nM membrane-bound secreted vesicles that are readily isolated from biological fluids such as urine (UEs). Exosomes contain proteins, micro RNA (miRNA), messenger RNA (mRNA), and long non-coding RNA (lncRNA) from their cells of origin. Although miRNA, protein and lncRNA have been isolated from serum as potential biomarkers for benign and malignant disease, it is unknown if lncRNAs in UEs from urothelial bladder cancer (UBC) patients can serve as biomarkers. lncRNAs are > 200 nucleotide long transcripts that do not encode protein and play critical roles in tumor biology. As the number of recognized tumor-associated lncRNAs continues to increase, there is a parallel need to include lncRNAs into biomarker discovery and therapeutic target algorithms. The lncRNA HOX transcript antisense RNA (HOTAIR) has been shown to facilitate tumor initiation and progression and is associated with poor prognosis in several cancers. The importance of HOTAIR in cancer biology has sparked interest in using HOTAIR as a biomarker and potential therapeutic target. Here we show HOTAIR and several tumor-associated lncRNAs are enriched in UEs from UBC patients with high-grade muscle-invasive disease (HGMI pT2-pT4). Knockdown of HOTAIR in UBC cell lines reduces in vitro migration and invasion. Importantly, loss of HOTAIR expression in UBC cell lines alters expression of epithelial-to-mesenchyme transition (EMT) genes including SNAI1, TWIST1, ZEB1, ZO1, MMP1 LAMB3, and LAMC2. Finally, we used RNA-sequencing to identify four additional lncRNAs enriched in UBC patient UEs. These data, suggest that UE-derived lncRNA may potentially serve as biomarkers and therapeutic targets.

Indexed as

Blotting, WesternCell LineCell MovementDisease ProgressionEpithelial-Mesenchymal TransitionExosomesFluorescent Antibody TechniqueGene Expression Regulation, NeoplasticHEK293 CellsHumansMicroRNAsMicroscopy, ElectronRNA, Long NoncodingRNA, Small InterferingUrinary Bladder NeoplasmsHOTAIR long untranslated RNA, humanMicroRNAsRNA, Long NoncodingRNA, Small Interfering

Identifiers

PMID26800519
PMCPMC4723257
OpenAlexW2271709287

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.