Evidence map›Paper›PMID 26799285›Full record

ArticleOncotarget2016

Deletions of multidrug resistance gene loci in breast cancer leads to the down-regulation of its expression and predict tumor response to neoadjuvant chemotherapy.

Nikolai V Litviakov, Nadezhda V Cherdyntseva, Matvey M Tsyganov, Elena M Slonimskaya, Marina K Ibragimova, Polina V Kazantseva, Julia Kzhyshkowska, Eugeniy L Choinzonov

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 43 citations in OpenAlex.

  1. Review
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  10. Impact of theInfection and drug resistance · 2022
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  18. Silencing ofFrontiers in cell and developmental biology · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Nikolai V LitviakovLaboratory of Oncovirology, Tomsk Cancer Research Institute, Tomsk, Russian Federation.
Nadezhda V CherdyntsevaLaboratory of Translational Cell and Molecular Biomedicine, National Research Tomsk State University, Tomsk, Russian Federation.
Matvey M TsyganovLaboratory of Oncovirology, Tomsk Cancer Research Institute, Tomsk, Russian Federation.
Elena M SlonimskayaDepartment of General Oncology, Tomsk Cancer Research Institute, Tomsk, Russian Federation.
Marina K IbragimovaLaboratory of Oncovirology, Tomsk Cancer Research Institute, Tomsk, Russian Federation.
Polina V KazantsevaDepartment of General Oncology, Tomsk Cancer Research Institute, Tomsk, Russian Federation.
Julia KzhyshkowskaLaboratory of Translational Cell and Molecular Biomedicine, National Research Tomsk State University, Tomsk, Russian Federation.
Eugeniy L ChoinzonovDepartment of Head and Neck Cancer, Tomsk Cancer Research Institute, Tomsk, Russian Federation.
Tomsk Cancer Research Institute · RUHeidelberg University · DENational Research Tomsk State University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Neoadjuvant chemotherapy (NAC) is intensively used for the treatment of primary breast cancer. In our previous studies, we reported that clinical tumor response to NAC is associated with the change of multidrug resistance (MDR) gene expression in tumors after chemotherapy. In this study we performed a combined analysis of MDR gene locus deletions in tumor DNA, MDR gene expression and clinical response to NAC in 73 BC patients. Copy number variations (CNVs) in biopsy specimens were tested using high-density microarray platform CytoScanTM HD Array (Affymetrix, USA). 75%-100% persons having deletions of MDR gene loci demonstrated the down-regulation of MDR gene expression. Expression of MDR genes was 2-8 times lower in patients with deletion than in patients having no deletion only in post-NAC tumors samples but not in tumor tissue before chemotherapy. All patients with deletions of ABCB1 ABCB 3 ABCC5 gene loci--7q21.1, 6p21.32, 3q27 correspondingly, and most patients having deletions in ABCC1 (16p13.1), ABCC2 (10q24), ABCG1 (21q22.3), ABCG2 (4q22.1), responded favorably to NAC. The analysis of all CNVs, including both amplification and deletion showed that the frequency of 13q14.2 deletion was 85% among patients bearing tumor with the deletion at least in one MDR gene locus versus 9% in patients with no deletions. Differences in the frequency of 13q14.2 deletions between the two groups were statistically significant (p = 2.03 × 10(-11), Fisher test, Bonferroni-adjusted p = 1.73 × 10(-8)). In conclusion, our study for the first time demonstrates that deletion MDR gene loci can be used as predictive marker for tumor response to NAC.

Indexed as

Gene DeletionGene Expression Regulation, NeoplasticNeoadjuvant TherapyAdultAgedAntineoplastic Combined Chemotherapy ProtocolsBreast NeoplasmsCarcinoma, Ductal, BreastCarcinoma, LobularCarcinoma, MedullaryDNA Copy Number VariationsDown-RegulationDrug Resistance, MultipleDrug Resistance, NeoplasmFemaleFollow-Up StudiesABCC2 protein, humanMultidrug Resistance-Associated Protein 2RNA, Messengerbreast cancerchromosomal abnormalitiesexpression of multidrug resistance genesmicroarray analysisneoadjuvant chemotherapy

Identifiers

PMID26799285
PMCPMC4884957
OpenAlexW2276294749

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.