Evidence map›Paper›PMID 26798564›Full record

ArticleJournal of genetic syndromes & gene therapy2015

Novel mutation-deletion in the

Izabela Szymońska, Thore Langfeldt Borgenvik, Tina Margrethe Karlsvik, Anders Halsen, Bianka Kathryn Malecki, Sindre Ervik Saetre, Mateusz Jagła, Piotr Kruczek, Anna Madetko Talowska, Grażyna Drabik and 2 more

Open access · greenAbstract read
In one paragraph

Article in Journal of genetic syndromes & gene therapy, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Izabela SzymońskaDepartment of Pediatrics, Jagiellonian University Medical College, Krakow, Poland, EU.
Thore Langfeldt BorgenvikJagiellonian University Medical College, Krakow, Poland, EU.
Tina Margrethe KarlsvikJagiellonian University Medical College, Krakow, Poland, EU.
Anders HalsenJagiellonian University Medical College, Krakow, Poland, EU.
Bianka Kathryn MaleckiJagiellonian University Medical College, Krakow, Poland, EU; Phoenix Biomolecular Engineering Foundation, San Francisco, CA, USA.
Sindre Ervik SaetreJagiellonian University Medical College, Krakow, Poland, EU.
Mateusz JagłaDepartment of Pediatrics, Jagiellonian University Medical College, Krakow, Poland, EU.
Piotr KruczekDepartment of Pediatrics, Jagiellonian University Medical College, Krakow, Poland, EU.
Anna Madetko TalowskaDepartment of Clinical Genetics, Jagiellonian University Medical College, Krakow, Poland, EU.
Grażyna DrabikDepartment of Pathology, Children's University Hospital, Kraków, Poland, EU.
Magdalena ZasadaDepartment of Pediatrics, Jagiellonian University Medical College, Krakow, Poland, EU.
Marek MaleckiPhoenix Biomolecular Engineering Foundation, San Francisco, CA, USA; NMRFM, National Institutes of Health, Madison, WI, USA; University of Wisconsin, Madison, WI, USA.
Jagiellonian University · PL

Funding

WATER DISTRIB:PHYSICAL PROPERT:PIZZA &LMPS MOZZARELLA CHEESES:EARLY STAGE MATURP41RR002301 · NCRR · UNIVERSITY OF WISCONSIN-MADISON · PI MARKLEY, JOHN LUTE · 1985 to 2011
$13.0M
TR&D 3: TECHNOLOGY DEVELOPMENT FOR NMR STUDIES OF SMALL MOLECULES (METABOLOMICS, NATURAL PRODUCTS, METABOLITE-PROTEIN INTERACTIONS) pp.537-585 P41GM103399 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI MARKLEY, JOHN LUTE · 2012 to 2019
$9.4M
NCRR NIH HHS P41 RR002301NIGMS NIH HHS P41 GM103399
6 · The paper itself

Abstract

introductionNeuroblastoma (NB), Hirschsprung disease (HSCR), Congenital Central Hypoventilation Syndrome (CCHS), clinically referred as the NB-HSCR-CCHS cluster, are genetic disorders linked to mutations in the SPECIFIC

aimThe specific aim of this project is to define the PATIENT: A one day old male patient presented to the Jagiellonian University Medical College (JUMC), American Children Hospital, neonatal Intensive Care Unit (ICU) due to abdominal distention, vomiting, and severe apneic episodes. With the preliminary diagnosis of the NB-HSCR-CCHS, the blood and tissue samples were acquired from the child, as well as from the child's parents. All procedures were pursued in accordance with the Declaration of Helsinki, with the patient's Guardian Informed Consent and the approval from the Institutional Review Board. GENETIC/GENOMIC

methodsKaryotyping was analyzed based upon Giemsa banding. The patient's genomic DNA was extracted from peripheral blood and amplified by polymerase chain reaction. Direct microfluidic Sanger sequencing was performed on the genomic DNA amplicons. These procedures were pursued in addition to the routine clinical examinations and tests.

resultsG-banding showed the normal 46 XY karyotype. However, genomic sequencing revealed a novel, heterozygous deletion (8 nucleotides: c.699-706, del8) in exon 3 of the

conclusionHerein, we report a novel

Indexed as

4p12Aganglionosis of the Terminal Bowel (ATB)Congenital Central Hypoventilation Syndrome (CCHS)deletionHaddad syndromeHirschsprung’s disease (HSCR)mutationNB-HSCR-CCHSNeuroblastoma (NB)NeurocristopathyPHOX2BSOX10

Identifiers

PMID26798564
PMCPMC4718609
OpenAlexW2402344912

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.