Evidence map›Paper›PMID 26798136›Full record

ArticleGenome research2016

A-type lamins bind both hetero- and euchromatin, the latter being regulated by lamina-associated polypeptide 2 alpha.

Kevin Gesson, Philipp Rescheneder, Michael P Skoruppa, Arndt von Haeseler, Thomas Dechat, Roland Foisner

Open access · bronzeAbstract read
In one paragraph

Article in Genome research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 137 papers.

0numbers the graph read from it
0cells of the map it votes in
137citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

137 citing papers in PubMed, 215 citations in OpenAlex.

  1. Article
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  10. The molecular basis of lamin-specific chromatin interactions.Nature structural & molecular biology · 2025
    Article
  11. Article
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  14. Confined Migration Drives Stem Cell Differentiation.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  15. Article
  16. Review
  17. Article
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  20. Article

77 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Kevin GessonDepartment of Medical Biochemistry, Medical University of Vienna, A-1030 Vienna, Austria;
Philipp ReschenederCenter for Integrative Bioinformatics Vienna, Max F. Perutz Laboratories (MFPL), Medical University of Vienna and University of Vienna, Vienna Biocenter (VBC), A-1030 Vienna, Austria;
Michael P SkoruppaDepartment of Medical Biochemistry, Medical University of Vienna, A-1030 Vienna, Austria;
Arndt von HaeselerCenter for Integrative Bioinformatics Vienna, Max F. Perutz Laboratories (MFPL), Medical University of Vienna and University of Vienna, Vienna Biocenter (VBC), A-1030 Vienna, Austria; Bioinformatics and Computational Biology, Faculty of Computer Science, University of Vienna, A-1030 Vienna, Austria.
Thomas DechatDepartment of Medical Biochemistry, Medical University of Vienna, A-1030 Vienna, Austria;
Roland FoisnerDepartment of Medical Biochemistry, Medical University of Vienna, A-1030 Vienna, Austria;ORCID http://orcid.org/0000-0003-4734-4647
Medical University of Vienna · ATMax Perutz Labs · ATUniversity of Vienna · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lamins are components of the peripheral nuclear lamina and interact with heterochromatic genomic regions, termed lamina-associated domains (LADs). In contrast to lamin B1 being primarily present at the nuclear periphery, lamin A/C also localizes throughout the nucleus, where it associates with the chromatin-binding protein lamina-associated polypeptide (LAP) 2 alpha. Here, we show that lamin A/C also interacts with euchromatin, as determined by chromatin immunoprecipitation of euchromatin- and heterochromatin-enriched samples. By way of contrast, lamin B1 was only found associated with heterochromatin. Euchromatic regions occupied by lamin A/C overlap with those bound by LAP2alpha, and lack of LAP2alpha in LAP2alpha-deficient cells shifts binding of lamin A/C toward more heterochromatic regions. These alterations in lamin A/C-chromatin interactions correlate with changes in epigenetic histone marks in euchromatin but do not significantly affect gene expression. Loss of lamin A/C in heterochromatic regions in LAP2alpha-deficient cells, however, correlated with increased gene expression. Our data show a novel role of nucleoplasmic lamin A/C and LAP2alpha in regulating euchromatin.

Indexed as

Gene Expression RegulationBinding SitesCell LineChromatin ImmunoprecipitationDNA-Binding ProteinsEpigenesis, GeneticEuchromatinGene Knockout TechniquesGene RearrangementHeterochromatinHigh-Throughput Nucleotide SequencingHistonesLamin Type AMembrane ProteinsProtein BindingDNA-Binding ProteinsEuchromatinHeterochromatinHistoneslamina-associated polypeptide 2Lamin Type AMembrane Proteins

Identifiers

PMID26798136
PMCPMC4817770
OpenAlexW2254635737

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.