Evidence map›Paper›PMID 26798135›Full record

ArticleGenes & development2016

The p53-Mdm2 interaction and the E3 ligase activity of Mdm2/Mdm4 are conserved from lampreys to humans.

Cynthia R Coffill, Alison P Lee, Jia Wei Siau, Sharon M Chee, Thomas L Joseph, Yaw Sing Tan, Arumugam Madhumalar, Boon-Hui Tay, Sydney Brenner, Chandra S Verma and 3 more

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 35 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Silencing of Xeroderma Pigmentosum Group D Gene Promotes Hepatoma Cell Growth by Reducing P53 Expression.Medical science monitor : international medical journal of experimental and clinical research · 2018
    Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Lampreys, the jawless vertebrates, contain only two ParaHox gene clusters.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  20. Evolution of the p53-MDM2 pathway.BMC evolutionary biology · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 3 countries.

Cynthia R Coffillp53 Laboratory (p53Lab), Agency for Science, Technology, and Research (A*STAR), Singapore 138648;
Alison P LeeInstitute of Molecular and Cellular Biology, A*STAR, Singapore 138673;
Jia Wei Siaup53 Laboratory (p53Lab), Agency for Science, Technology, and Research (A*STAR), Singapore 138648;
Sharon M Cheep53 Laboratory (p53Lab), Agency for Science, Technology, and Research (A*STAR), Singapore 138648;
Thomas L JosephBioinformatics Institute, A*STAR, Singapore 138671;
Yaw Sing TanBioinformatics Institute, A*STAR, Singapore 138671;
Arumugam MadhumalarNational Institute of Immunology, Aruna Asaf Ali Marg, New Delhi 110067, India;
Boon-Hui TayInstitute of Molecular and Cellular Biology, A*STAR, Singapore 138673;
Sydney BrennerInstitute of Molecular and Cellular Biology, A*STAR, Singapore 138673; Okinawa Institute of Science and Technology Graduate University, Onna-son, Okinawa 904-0495, Japan;
Chandra S VermaBioinformatics Institute, A*STAR, Singapore 138671; School of Biological Sciences, Nanyang Technological University, Singapore 637551; Department of Biological Sciences, National University of Singapore, Singapore 117543;
Farid J Ghadessyp53 Laboratory (p53Lab), Agency for Science, Technology, and Research (A*STAR), Singapore 138648;
Byrappa VenkateshInstitute of Molecular and Cellular Biology, A*STAR, Singapore 138673; Department of Paediatrics, Yong Loo Lin School of Medicine, National University of Singapore, Singapore 119228.
David P Lanep53 Laboratory (p53Lab), Agency for Science, Technology, and Research (A*STAR), Singapore 138648;
Agency for Science, Technology and Research · SGInstitute of Molecular and Cell Biology · SGNational University of Singapore · SGBioinformatics Institute · SGNational Institute of Immunology · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The extant jawless vertebrates, represented by lampreys and hagfish, are the oldest group of vertebrates and provide an interesting genomic evolutionary pivot point between invertebrates and jawed vertebrates. Through genome analysis of one of these jawless vertebrates, the Japanese lamprey (Lethenteron japonicum), we identified all three members of the important p53 transcription factor family--Tp53, Tp63, and Tp73--as well as the Mdm2 and Mdm4 genes. These genes and their products are significant cellular regulators in human cancer, and further examination of their roles in this most distant vertebrate relative sheds light on their origin and coevolution. Their important role in response to DNA damage has been highlighted by the discovery of multiple copies of the Tp53 gene in elephants. Expression of lamprey p53, Mdm2, and Mdm4 proteins in mammalian cells reveals that the p53-Mdm2 interaction and the Mdm2/Mdm4 E3 ligase activity existed in the common ancestor of vertebrates and have been conserved for >500 million years of vertebrate evolution. Lamprey Mdm2 degrades human p53 with great efficiency, but this interaction is not blocked by currently available small molecule inhibitors of the human HDM2 protein, suggesting utility of lamprey Mdm2 in the study of the human p53 signaling pathway.

Indexed as

Amino Acid SequenceAnimalsCells, CulturedConserved SequenceGenomeHumansLampreysMiceModels, MolecularNuclear ProteinsPhylogenyProtein BindingProteolysisProto-Oncogene Proteins c-mdm2Recombinant ProteinsSequence AlignmentNuclear ProteinsProto-Oncogene Proteins c-mdm2Recombinant ProteinsTumor Suppressor Protein p53evolutionlampreyMdm2Mdm4p53

Identifiers

PMID26798135
PMCPMC4743058
OpenAlexW2266960439

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.