Evidence map›Paper›PMID 26798103›Full record

ArticleGenome announcements2016

Draft Genome Sequence of Janthinobacterium sp. Ant5-2-1, Isolated from Proglacial Lake Podprudnoye in the Schirmacher Oasis of East Antarctica.

Hyunmin Koo, Bailey M Strope, Eddy H Kim, Adel M Shabani, Ranjit Kumar, Michael R Crowley, Dale T Andersen, Asim K Bej

Abstract read
In one paragraph

Article in Genome announcements, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. The diversity of bacterial endophytes fromCurrent research in microbial sciences · 2022
    Article
  3. Article
  4. Article
  5. Article
  6. Microorganisms · 2019
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Draft Genome Sequences of TwoGenome announcements · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Hyunmin KooDepartment of Biology, University of Alabama at Birmingham, Birmingham, Alabama, USA.ORCID http://orcid.org/0000-0001-6630-2165
Bailey M StropeDepartment of Biology, University of Alabama at Birmingham, Birmingham, Alabama, USA.
Eddy H KimDepartment of Biology, University of Alabama at Birmingham, Birmingham, Alabama, USA.
Adel M ShabaniDepartment of Biology, University of Alabama at Birmingham, Birmingham, Alabama, USA.
Ranjit KumarCCTS Biomedical Informatics, University of Alabama at Birmingham, Birmingham, Alabama, USA.
Michael R CrowleyHeflin Center for Genomic Sciences, University of Alabama at Birmingham, Birmingham, Alabama, USA.
Dale T AndersenCarl Sagan Center, SETI Institute, Mountain View, California, USA.
Asim K BejDepartment of Biology, University of Alabama at Birmingham, Birmingham, Alabama, USA abej@uab.edu.ORCID http://orcid.org/0000-0003-3060-1088

Funding

UAB Center for Clinical and Translational Science (CCTS)UL1TR001417 · NCATS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI KIMBERLY, ROBERT P. · 2015 to 2018
$31.4M
UAB Center for Clinical and Translational Science (CCTS) UL1UL1TR000165 · NCATS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI KIMBERLY, ROBERT P. · 2012 to 2013
$9.6M
NCATS NIH HHS UL1 TR000165NCATS NIH HHS UL1 TR001417
6 · The paper itself

Abstract

Janthinobacterium sp. Ant5-2-1, isolated from the Schirmacher Oasis of East Antarctica, produces a purple-violet pigment, manifests diverse energy metabolism abilities, and tolerates cold, ultraviolet radiation, and other environmental stressors. We report here the 6.19-Mb draft genome of strain Ant5-2-1, which will help understand its survival mechanisms in extreme Antarctic ecosystems.

Identifiers

PMID26798103
PMCPMC4722270

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.