Evidence map›Paper›PMID 26798068›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Balance between short and long isoforms of cFLIP regulates Fas-mediated apoptosis in vivo.

Daniel R Ram, Vladimir Ilyukha, Tatyana Volkova, Anton Buzdin, Albert Tai, Irina Smirnova, Alexander Poltorak

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 45 citations in OpenAlex.

  1. Review
  2. Article
  3. Raver1 linksProceedings of the National Academy of Sciences of the United States of America · 2025
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  8. Quantitative Analysis of Isoform Switching in Cancer.International journal of molecular sciences · 2023
    Article
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  10. Review
  11. Article
  12. Review
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  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. cFLIPScience (New York, N.Y.) · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Daniel R RamProgram in Immunology, Sackler Graduate School, Tufts University, Boston, MA 02111;
Vladimir IlyukhaInstitute of High-Tech Biomedicine, Petrozavodsk State University, Petrozavodsk, Republic of Karelia, 117198 Russia;
Tatyana VolkovaInstitute of High-Tech Biomedicine, Petrozavodsk State University, Petrozavodsk, Republic of Karelia, 117198 Russia;
Anton BuzdinLaboratory of Bioinformatics, D. Rogachyov Federal Research Center for Pediatrics Hematology, Oncology and Immunology, Moscow, 117198 Russia; Centre for Convergence of Nano-, Bio-, Information and Cognitive Sciences and Technologies, National Research Centre "Kurchatov Institute," Moscow, 123182 Russia;
Albert TaiDepartment of Integrative Physiology and Pathobiology, Tufts University School of Medicine, Boston, MA 02111.
Irina SmirnovaDepartment of Integrative Physiology and Pathobiology, Tufts University School of Medicine, Boston, MA 02111.
Alexander PoltorakProgram in Immunology, Sackler Graduate School, Tufts University, Boston, MA 02111; Institute of High-Tech Biomedicine, Petrozavodsk State University, Petrozavodsk, Republic of Karelia, 117198 Russia; Department of Integrative Physiology and Pathobiology, Tufts University School of Medicine, Boston, MA 02111 Alexander.Poltorak@tufts.edu.
Petrozavodsk State University · RUTufts University · USDmitry Rogachev National Research Center of Pediatric Hematology, Oncology and Immunology · RU

Funding

Hyper-Responsiveness to TLR Agonists in Wild Derived MiceR01AI056234 · NIAID · TUFTS UNIVERSITY BOSTON · PI POLTORAK, ALEXANDER · 2003 to 2023
$8.4M
Understanding genetic basis for resistance to TNF-induced lethal shock using newR21AI090419 · NIAID · TUFTS UNIVERSITY BOSTON · PI POLTORAK, ALEXANDER · 2010 to 2011
$451k
Hyper-Responsiveness to TLR Agonists in Wild Derived MiceR56AI056234 · NIAID · TUFTS UNIVERSITY BOSTON · PI POLTORAK, ALEXANDER · 2008 to 2008
$411k
NIAID NIH HHS AI056234NIAID NIH HHS AI090419NIAID NIH HHS R01 AI056234NIAID NIH HHS R21 AI090419NIAID NIH HHS R56 AI056234
6 · The paper itself

Abstract

cFLIP, an inhibitor of apoptosis, is a crucial regulator of cellular death by apoptosis and necroptosis; its importance in development is exemplified by the embryonic lethality in cFLIP-deficient animals. A homolog of caspase 8 (CASP8), cFLIP exists in two main isoforms: cFLIPL (long) and cFLIPR (short). Although both splice variants regulate death receptor (DR)-induced apoptosis by CASP8, the specific role of each isoform is poorly understood. Here, we report a previously unidentified model of resistance to Fas receptor-mediated liver failure in the wild-derived MSM strain, compared with susceptibility in C57BL/6 (B6) mice. Linkage analysis in F2 intercross (B6 x MSM) progeny identified several MSM loci controlling resistance to Fas-mediated death, including the caspase 8- and FADD-like apoptosis regulator (Cflar) locus encoding cFLIP. Furthermore, we identified a 21-bp insertion in the 3' UTR of the fifth exon of Cflar in MSM that influences differential splicing of cFLIP mRNA. Intriguingly, we observed that MSM liver cells predominantly express the FLIPL variant, in contrast to B6 liver cells, which have higher levels of cFLIPR. In keeping with this finding, genome-wide RNA sequencing revealed a relative abundance of FLIPL transcripts in MSM hepatocytes whereas B6 liver cells had significantly more FLIPR mRNA. Importantly, we show that, in the MSM liver, CASP8 is present exclusively as its cleaved p43 product, bound to cFLIPL. Because of partial enzymatic activity of the heterodimer, it might prevent necroptosis. On the other hand, it prevents cleavage of CASP8 to p10/20 necessary for cleavage of caspase 3 and, thus, apoptosis induction. Therefore, MSM hepatocytes are predisposed for protection from DR-mediated cell death.

Indexed as

Alternative SplicingAnimalsAntibodiesApoptosisBase PairingBase SequenceCASP8 and FADD-Like Apoptosis Regulating ProteinCaspase 8Disease SusceptibilityFas Ligand Proteinfas ReceptorGenetic LinkageGenetic LociGenomeLiverMacrophagesAntibodiesCASP8 and FADD-Like Apoptosis Regulating ProteinCaspase 8Fas Ligand ProteinFas protein, mousefas ReceptorProtein Isoformsapoptosiscaspase 8cFLIPFas-receptorliver failure

Identifiers

PMID26798068
PMCPMC4760830
OpenAlexW2264197136

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.