Evidence map›Paper›PMID 26797431›Full record

ArticleFunctional & integrative genomics2016

Transcriptome dynamics of a susceptible wheat upon Fusarium head blight reveals that molecular responses to Fusarium graminearum infection fit over the grain development processes.

Cherif Chetouhi, Ludovic Bonhomme, Pauline Lasserre-Zuber, Florence Cambon, Sandra Pelletier, Jean-Pierre Renou, Thierry Langin

Abstract read
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In one paragraph

Article in Functional & integrative genomics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
13.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 43 citations in OpenAlex.

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  4. Boosting Immunity and Management against WheatPlants (Basel, Switzerland) · 2023
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  5. Article
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  7. Linking Multi-Omics to Wheat Resistance Types toInternational journal of molecular sciences · 2022
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Cherif ChetouhiINRA, UMR1095, Genetics, Diversity and Ecophysiology of Cereals, Clermont-Ferrand, F-63100, France.
Ludovic BonhommeINRA, UMR1095, Genetics, Diversity and Ecophysiology of Cereals, Clermont-Ferrand, F-63100, France. ludovic.bonhomme@clermont.inra.fr.
Pauline Lasserre-ZuberINRA, UMR1095, Genetics, Diversity and Ecophysiology of Cereals, Clermont-Ferrand, F-63100, France.
Florence CambonINRA, UMR1095, Genetics, Diversity and Ecophysiology of Cereals, Clermont-Ferrand, F-63100, France.
Sandra PelletierINRA, Institut de Recherche en Horticulture et Semences, Beaucouzé, F-49071, France.
Jean-Pierre RenouINRA, Institut de Recherche en Horticulture et Semences, Beaucouzé, F-49071, France.
Thierry LanginINRA, UMR1095, Genetics, Diversity and Ecophysiology of Cereals, Clermont-Ferrand, F-63100, France. thierry.langin@clermont.inra.fr.
Génétique, Diversité, Écophysiologie des Céréales · FRInstitut de recherche en horticulture et semences · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In many plant/pathogen interactions, host susceptibility factors are key determinants of disease development promoting pathogen growth and spreading in plant tissues. In the Fusarium head blight (FHB) disease, the molecular basis of wheat susceptibility is still poorly understood while it could provide new insights into the understanding of the wheat/Fusarium graminearum (Fg) interaction and guide future breeding programs to produce cultivars with sustainable resistance. To identify the wheat grain candidate genes, a genome-wide gene expression profiling was performed in the French susceptible wheat cultivar, Recital. Gene-specific two-way ANOVA of about 40 K transcripts at five grain developmental stages identified 1309 differentially expressed genes. Out of these, 536 were impacted by the Fg effect alone. Most of these Fg-responsive genes belonged to biological and molecular functions related to biotic and abiotic stresses indicating the activation of common stress pathways during susceptibility response of wheat grain to FHB. This analysis revealed also 773 other genes displaying either specific Fg-responsive profiles along with grain development stages or synergistic adjustments with the grain development effect. These genes were involved in various molecular pathways including primary metabolism, cell death, and gene expression reprogramming. An increasingly complex host response was revealed, as was the impact of both Fg infection and grain ontogeny on the transcription of wheat genes. This analysis provides a wealth of candidate genes and pathways involved in susceptibility responses to FHB and depicts new clues to the understanding of the susceptibility determinism in plant/pathogen interactions.

Indexed as

Gene Expression Regulation, PlantTranscriptomeDisease ResistanceDisease SusceptibilityEdible GrainFusariumGene Expression ProfilingGene OntologyGenome, PlantHost-Pathogen InteractionsMetabolic Networks and PathwaysMolecular Sequence AnnotationPlant DiseasesPlant ProteinsTriticumPlant ProteinsFHBFusarium graminearumGenome-wide transcriptomicsSusceptibility responseWheat

Identifiers

PMID26797431
OpenAlexW2300149908

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.