Evidence map›Paper›PMID 26797294›Full record

ArticleBMC systems biology2016

Modeling the ascorbate-glutathione cycle in chloroplasts under light/dark conditions.

Edelmira Valero, Hermenegilda Macià, Ildefonso M De la Fuente, José-Antonio Hernández, María-Isabel González-Sánchez, Francisco García-Carmona

Abstract read
In one paragraph

Article in BMC systems biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

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  6. Frontiers in plant science · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Edelmira ValeroDepartment of Physical Chemistry, School of Industrial Engineering, University of Castilla-La Mancha, Campus Universitario, s/n, Albacete, E-02071, Spain. Edelmira.Valero@uclm.es.
Hermenegilda MaciàDepartment of Mathematics, School of Computer Science, University of Castilla-La Mancha, Campus Universitario, s/n, Albacete, E-02071, Spain. Hermenegilda.Macia@uclm.es.
Ildefonso M De la FuenteInstitute of Parasitology and Biomedicine "López-Neyra", CSIC, Granada, Spain. mtpmadei@ehu.es.
José-Antonio HernándezDepartment of Plant Breeding, CEBAS, CSIC, Group Fruit Trees Biotechnology, Murcia, Spain. jahernan@cebas.csic.es.
María-Isabel González-SánchezDepartment of Physical Chemistry, School of Industrial Engineering, University of Castilla-La Mancha, Campus Universitario, s/n, Albacete, E-02071, Spain. MIsabel.Gonzalez@uclm.es.
Francisco García-CarmonaDepartment of Biochemistry and Molecular Biology A, Biology Faculty, University of Murcia, Murcia, E-30100, Spain. gcarmona@um.es.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLight/dark cycles are probably the most important environmental signals that regulate plant development. Light is essential for photosynthesis, but an excess, in combination with the unavoidable presence of atmospheric oxygen inside the chloroplast, leads to excessive reactive oxygen species production. Among the defense mechanisms that activate plants to cope with environmental stress situations, it is worth noting the ascorbate-glutathione cycle, a complex metabolic pathway in which a variety of photochemical, chemical and enzymatic steps are involved.

resultsWe herein studied the dynamic behavior of this pathway under light/dark conditions and for several consecutive days. For this purpose, a mathematical model was developed including a variable electron source with a rate law proportional to the intensity of solar irradiance during the photoperiod, and which is continuously turned off at night and on again the next day. The model is defined by a nonlinear system of ordinary differential equations with an on/off time-dependent input, including a parameter to simulate the fact that the photoperiod length is not constant throughout the year, and which takes into account the particular experimental kinetics of each enzyme involved in the pathway. Unlike previous models, which have only provided steady-state solutions, the present model is able to simulate diurnal fluctuations in the metabolite concentrations, fluxes and enzymatic rates involved in the network.

conclusionsThe obtained results are broadly consistent with experimental observations and highlight the key role played by ascorbate recycling for plants to adapt to their surrounding environment. This approach provides a new strategy to in vivo studies to analyze plant defense mechanisms against oxidative stress induced by external changes, which can also be extrapolated to other complex metabolic pathways to constitute a useful tool to the scientific community in general.

Indexed as

DarknessModels, BiologicalAntioxidantsAscorbic AcidChloroplastsDose-Response Relationship, RadiationGlutathioneNADPOxidative StressPhotosynthesisPlantsAntioxidantsAscorbic AcidGlutathioneNADP

Identifiers

PMID26797294
PMCPMC4722729

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.