Evidence map›Paper›PMID 26795439›Full record

ArticleNature communications2016

Complex disease and phenotype mapping in the domestic dog.

Jessica J Hayward, Marta G Castelhano, Kyle C Oliveira, Elizabeth Corey, Cheryl Balkman, Tara L Baxter, Margret L Casal, Sharon A Center, Meiying Fang, Susan J Garrison and 9 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 166 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
166citing papers in PubMed, 3 pooled it
15.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

166 citing papers in PubMed, 3 syntheses or guidelines pooled it, 276 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
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  10. Fine-scale recombination rates inferred using the canFam4 assembly are strongly correlated with previous maps of dog recombination.Mammalian genome : official journal of the International Mammalian Genome Society · 2025
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  11. A 120-y time series of genomes reveals the consequences of closed breeding in German Shepherd Dogs.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  12. Genetic testing predicts appearance but not behavior in dogs.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  13. Imputation of ancient canid genomes reveals inbreeding history over the past 10,000 years.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  14. Article
  15. Article
  16. Genotypic and phenotypic consequences of domestication in dogs.bioRxiv : the preprint server for biology · 2025
    Article
  17. Article
  18. Article
  19. Owner-Perceived Undesirable Behaviours in Young Dogs and Changes with Age.Animals : an open access journal from MDPI · 2025
    Article
  20. Article

106 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 3 institutions in 2 countries.

Jessica J HaywardDepartment of Biomedical Sciences, College of Veterinary Medicine, Cornell University, Ithaca, New York 14853, USA.
Marta G CastelhanoDepartment of Clinical Sciences, College of Veterinary Medicine, Cornell University, Ithaca, New York 14853, USA.
Kyle C OliveiraDepartment of Biomedical Sciences, College of Veterinary Medicine, Cornell University, Ithaca, New York 14853, USA.
Elizabeth CoreyDepartment of Clinical Sciences, College of Veterinary Medicine, Cornell University, Ithaca, New York 14853, USA.
Cheryl BalkmanDepartment of Clinical Sciences, College of Veterinary Medicine, Cornell University, Ithaca, New York 14853, USA.
Tara L BaxterDepartment of Biomedical Sciences, College of Veterinary Medicine, Cornell University, Ithaca, New York 14853, USA.
Margret L CasalSchool of Veterinary Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Sharon A CenterDepartment of Clinical Sciences, College of Veterinary Medicine, Cornell University, Ithaca, New York 14853, USA.
Meiying FangCollege of Animal Science and Technology, China Agricultural University, Beijing 100094, China.
Susan J GarrisonDepartment of Clinical Sciences, College of Veterinary Medicine, Cornell University, Ithaca, New York 14853, USA.
Sara E KallaDepartment of Clinical Sciences, College of Veterinary Medicine, Cornell University, Ithaca, New York 14853, USA.
Pavel KornilievDepartment of Biological Statistics and Computational Biology, Cornell University, Ithaca, New York 14853, USA.
Michael I KotlikoffDepartment of Biomedical Sciences, College of Veterinary Medicine, Cornell University, Ithaca, New York 14853, USA.
N S MoiseDepartment of Clinical Sciences, College of Veterinary Medicine, Cornell University, Ithaca, New York 14853, USA.
Laura M ShannonDepartment of Biomedical Sciences, College of Veterinary Medicine, Cornell University, Ithaca, New York 14853, USA.
Kenneth W SimpsonDepartment of Clinical Sciences, College of Veterinary Medicine, Cornell University, Ithaca, New York 14853, USA.
Nathan B SutterBiology Department, La Sierra University, Riverside, California 92505, USA.
Rory J TodhunterDepartment of Clinical Sciences, College of Veterinary Medicine, Cornell University, Ithaca, New York 14853, USA.
Adam R BoykoDepartment of Biomedical Sciences, College of Veterinary Medicine, Cornell University, Ithaca, New York 14853, USA.
Cornell University · USLa Sierra University · USUniversity of Pennsylvania · US

Funding

Tools for Genetic and Genomic Studies in the DogR24GM082910 · NIGMS · CORNELL UNIVERSITY · PI ACLAND, GREGORY M · 2008 to 2011
$1.5M
Comprehensive Characterization of Canine Genomic Structural DiversityR01GM103961 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BOYKO, ADAM R, KIDD, JEFFREY M · 2013 to 2016
$986k
NIGMS NIH HHS R01 GM103961NIGMS NIH HHS R24 GM082910NIGMS NIH HHS R24 GM082910-A1NIGMS NIH HHS R24 GM082910-S1
6 · The paper itself

Abstract

The domestic dog is becoming an increasingly valuable model species in medical genetics, showing particular promise to advance our understanding of cancer and orthopaedic disease. Here we undertake the largest canine genome-wide association study to date, with a panel of over 4,200 dogs genotyped at 180,000 markers, to accelerate mapping efforts. For complex diseases, we identify loci significantly associated with hip dysplasia, elbow dysplasia, idiopathic epilepsy, lymphoma, mast cell tumour and granulomatous colitis; for morphological traits, we report three novel quantitative trait loci that influence body size and one that influences fur length and shedding. Using simulation studies, we show that modestly larger sample sizes and denser marker sets will be sufficient to identify most moderate- to large-effect complex disease loci. This proposed design will enable efficient mapping of canine complex diseases, most of which have human homologues, using far fewer samples than required in human studies.

Indexed as

AnimalsBody SizeDog DiseasesDogsFemaleGenome-Wide Association StudyGenotypeHumansMalePhenotypeQuantitative Trait Loci

Identifiers

PMID26795439
PMCPMC4735900
OpenAlexW2268306343

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.