Evidence map›Paper›PMID 26794214›Full record

ArticleCurrent microbiology2016

CspE is Overproduced by Temperature Downshift in the Acinetobacter johnsonii DBP-3.

Dan Su, Linlin Hao, Fuwang Chen, Siming Li, Ahmed Mohamed Abdelrahman, Yu Zhang, Hao Yu, Songcai Liu, Mingtang Li

Abstract read
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In one paragraph

Article in Current microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.2field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 5 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Dan SuCollege of Animal Sciences, Jilin University, 5333 Xi'an Road, Changchun, 130062, China.
Linlin HaoCollege of Animal Sciences, Jilin University, 5333 Xi'an Road, Changchun, 130062, China.
Fuwang ChenCollege of Animal Sciences, Jilin University, 5333 Xi'an Road, Changchun, 130062, China.
Siming LiCollege of Animal Sciences, Jilin University, 5333 Xi'an Road, Changchun, 130062, China.
Ahmed Mohamed AbdelrahmanCollege of Resource and Environmental Science, Jilin Agricultural University, 2888 Xincheng Street, Changchun, 130118, China.
Yu ZhangCollege of Animal Sciences, Jilin University, 5333 Xi'an Road, Changchun, 130062, China.
Hao YuCollege of Animal Sciences, Jilin University, 5333 Xi'an Road, Changchun, 130062, China.
Songcai LiuCollege of Animal Sciences, Jilin University, 5333 Xi'an Road, Changchun, 130062, China. happy626288@sohu.com.
Mingtang LiCollege of Resource and Environmental Science, Jilin Agricultural University, 2888 Xincheng Street, Changchun, 130118, China. limtdoc2008@163.com.
Jilin University · CNJilin Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The denitrifying bacterium Acinetobacter johnsonii strain DBP-3 which was capable of removing phosphate, nitrate, and ammoniacal salt is psychrotolerant, whereas, the cold shock response mechanisms or the cold shock proteins (Csps) was unclear. In this article, the optimal growth temperature (25 °C) and cold shock temperature (7.5 °C) were determined firstly by an Arrhenius plot of the growth of the strain DBP-3. Then, among the seven cold shock-like protein genes which were cloned and identified referenced by A. johnsonii SH046 genome, qRT-PCR and shotgun-LTQ mass spectrometry showed that Csp3 and Csp4 were overexpressed under cold shock condition. Furthermore, Western blotting confirmed the result with the antibodies against Csp3 and Csp4 prepared by ourselves. Finally, the phylogenetic analysis showed that the similarity percent between Csp3 and Csp4 was 76.85 %, and Csp3 and Csp4 belonged to CspE family. The results indicated that CspE is overproduced by temperature downshift and may play an important role in the psychrotolerant process of strain DBP-3.

Indexed as

Gene Expression Regulation, BacterialAcinetobacterBacterial ProteinsCold Shock Proteins and PeptidesCold TemperaturePhylogenyBacterial ProteinsCold Shock Proteins and Peptides

Identifiers

PMID26794214
OpenAlexW2314381030

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.