Evidence map›Paper›PMID 26793208›Full record

ArticleFrontiers in plant science2015

Heat Shock Factor Genes of Tall Fescue and Perennial Ryegrass in Response to Temperature Stress by RNA-Seq Analysis.

Yan Wang, Ya Dai, Xiang Tao, Jia-Zhen Wang, Hai-Yang Cheng, Hong Yang, Xin-Rong Ma

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 59 citations in OpenAlex.

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  6. Review
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  8. A Heat Shock Transcription FactorInternational journal of molecular sciences · 2022
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  17. Identification of Heat-Responsive Genes in Guar [International journal of genomics · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Yan WangChengdu Institute of Biology, Chinese Academy of Sciences Chengdu, China.
Ya DaiChengdu Institute of Biology, Chinese Academy of SciencesChengdu, China; University of Chinese Academy of SciencesBeijing, China.
Xiang TaoChengdu Institute of Biology, Chinese Academy of Sciences Chengdu, China.
Jia-Zhen WangSchool of Life Sciences, Zunyi Normal College Zunyi, China.
Hai-Yang ChengChengdu Institute of Biology, Chinese Academy of Sciences Chengdu, China.
Hong YangChengdu Institute of Biology, Chinese Academy of Sciences Chengdu, China.
Xin-Rong MaChengdu Institute of Biology, Chinese Academy of Sciences Chengdu, China.
Chengdu Institute of Biology · CNChinese Academy of Sciences · CNUniversity of Chinese Academy of Sciences · CNZunyi Normal College · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Heat shock factors (Hsfs) are important regulators of stress-response in plants. However, our understanding of Hsf genes and their responses to temperature stresses in two Pooideae cool-season grasses, Festuca arundinacea, and Lolium perenne, is limited. Here we conducted comparative transcriptome analyses of plant leaves exposed to heat or cold stress for 10 h. Approximately, 30% and 25% of the genes expressed in the two species showed significant changes under heat and cold stress, respectively, including subsets of Hsfs and their target genes. We uncovered 74 Hsfs in F. arundinacea and 52 Hsfs in L. perenne, and categorized these genes into three subfamilies, HsfA, HsfB, and HsfC based on protein sequence homology to known Hsf members in model organisms. The Hsfs showed a strong response to heat and/or cold stress. The expression of HsfAs was elevated under heat stress, especially in class HsfA2, which exhibited the most dramatic responses. HsfBs were upregulated by the both temperature conditions, and HsfCs mainly showed an increase in expression under cold stress. The target genes of Hsfs, such as heat shock protein (HSP), ascorbate peroxidase (APX), inositol-3-phosphate synthase (IPS), and galactinol synthase (GOLS1), showed strong and unique responses to different stressors. We comprehensively detected Hsfs and their target genes in F. arundinacea and L. perenne, providing a foundation for future gene function studies and genetic engineering to improve stress tolerance in grasses and other crops.

Indexed as

cold stressexpression analysisheat shock factors (Hsfs)heat stressperennial ryegrassphylogenetic analysisRNA-Seqtall fescue

Identifiers

PMID26793208
PMCPMC4707269
OpenAlexW2258795811

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.