Evidence map›Paper›PMID 26792891›Full record

ArticleNucleic acids research2016

Structures of replication initiation proteins from staphylococcal antibiotic resistance plasmids reveal protein asymmetry and flexibility are necessary for replication.

Stephen B Carr, Simon E V Phillips, Christopher D Thomas

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 23 citations in OpenAlex.

  1. Journal of virology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Stephen B CarrResearch Complex at Harwell, Rutherford Appleton Laboratory, Harwell Oxford, Didcot, Oxfordshire OX11 0FA, UK Stephen.carr@rc-harwell.ac.uk.
Simon E V PhillipsResearch Complex at Harwell, Rutherford Appleton Laboratory, Harwell Oxford, Didcot, Oxfordshire OX11 0FA, UK.
Christopher D ThomasAstbury Centre for Structural Molecular Biology, University of Leeds, Leeds LS2 9JT, UK.ORCID http://orcid.org/0000-0003-0316-6391
Rutherford Appleton Laboratory · GBUniversity of Leeds · GB

Funding

Medical Research Council 92141Medical Research Council MC_EX_G0901251
6 · The paper itself

Abstract

Antibiotic resistance in pathogenic bacteria is a continual threat to human health, often residing in extrachromosomal plasmid DNA. Plasmids of the pT181 family are widespread and confer various antibiotic resistances to Staphylococcus aureus. They replicate via a rolling circle mechanism that requires a multi-functional, plasmid-encoded replication protein to initiate replication, recruit a helicase to the site of initiation and terminate replication after DNA synthesis is complete. We present the first atomic resolution structures of three such replication proteins that reveal distinct, functionally relevant conformations. The proteins possess a unique active site and have been shown to contain a catalytically essential metal ion that is bound in a manner distinct from that of any other rolling circle replication proteins. These structures are the first examples of the Rep_trans Pfam family providing insights into the replication of numerous antibiotic resistance plasmids from Gram-positive bacteria, Gram-negative phage and the mobilisation of DNA by conjugative transposons.

Indexed as

DNA ReplicationBacterial ProteinsBase SequenceCatalytic DomainCloning, MolecularCrystallography, X-RayDNA, BacterialDNA, CircularDNA HelicasesDrug Resistance, BacterialGene ExpressionIsoenzymesModels, MolecularMolecular Sequence DataPlasmidsProtein Structure, SecondaryBacterial ProteinsDNA, BacterialDNA, CircularDNA HelicasesIsoenzymesRecombinant Proteinsreplication initiator proteinTrans-Activators

Identifiers

PMID26792891
PMCPMC4797284
OpenAlexW2287737773

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.