Evidence map›Paper›PMID 26791101›Full record

ArticleScientific reports2016

Unique pioneer microbial communities exposed to volcanic sulfur dioxide.

Reiko Fujimura, Seok-Won Kim, Yoshinori Sato, Kenshiro Oshima, Masahira Hattori, Takashi Kamijo, Hiroyuki Ohta

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 26 citations in OpenAlex.

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  11. Synthetic Mutualism and the Intervention Dilemma.Life (Basel, Switzerland) · 2019
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Reiko FujimuraIbaraki University College of Agriculture, Ibaraki 300-0332, Japan.
Seok-Won KimDepartment of Computational Biology, Graduate School of Frontier Science, The University of Tokyo, Kashiwa, Chiba 277-8568, Japan.
Yoshinori SatoNational Research Institute for Cultural Properties, Tokyo, Tokyo, 110-8713, Japan.
Kenshiro OshimaDepartment of Computational Biology, Graduate School of Frontier Science, The University of Tokyo, Kashiwa, Chiba 277-8568, Japan.
Masahira HattoriDepartment of Computational Biology, Graduate School of Frontier Science, The University of Tokyo, Kashiwa, Chiba 277-8568, Japan.
Takashi KamijoGraduate School of Life and Environmental Science, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan.
Hiroyuki OhtaIbaraki University College of Agriculture, Ibaraki 300-0332, Japan.
The University of Tokyo · JPIbaraki University · JPIndependent Administrative Institution National Research Institute for Cultural Properties · JPUniversity of Tsukuba · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Newly exposed volcanic substrates contain negligible amounts of organic materials. Heterotrophic organisms in newly formed ecosystems require bioavailable carbon and nitrogen that are provided from CO2 and N2 fixation by pioneer microbes. However, the knowledge of initial ecosystem developmental mechanisms, especially the association between microbial succession and environmental change, is still limited. This study reports the unique process of microbial succession in fresh basaltic ash, which was affected by long-term exposure to volcanic sulfur dioxide (SO2). Here we compared the microbial ecosystems among deposits affected by SO2 exposure at different levels. The results of metagenomic analysis suggested the importance of autotrophic iron-oxidizing bacteria, particularly those involved in CO2 and N2 fixation, in the heavily SO2 affected site. Changes in the chemical properties of the deposits after the decline of the SO2 impact led to an apparent decrease in the iron-oxidizer abundance and a possible shift in the microbial community structure. Furthermore, the community structure of the deposits that had experienced lower SO2 gas levels showed higher similarity with that of the control forest soil. Our results implied that the effect of SO2 exposure exerted a selective pressure on the pioneer community structure by changing the surrounding environment of the microbes.

Indexed as

MicrobiotaSoil MicrobiologyCarbonJapanMetagenomicsNitrogenRNA, Ribosomal, 16SSulfur DioxideVolcanic EruptionsCarbonNitrogenRNA, Ribosomal, 16SSulfur Dioxide

Identifiers

PMID26791101
PMCPMC4726209
OpenAlexW2399058111

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.