Evidence map›Paper›PMID 26790498›Full record

ArticleEpidemiology and infection2016

Combined use of real-time PCR and nested sequence-based typing in survey of human Legionella infection.

T Qin, H Zhou, H Ren, W Shi, H Jin, X Jiang, Y Xu, M Zhou, J Li, J Wang and 2 more

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Epidemiology and infection, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 3 countries.

T QinState Key Laboratory for Infectious Disease Prevention and Control,National Institute for Communicable Disease Control and Prevention,Chinese Center for Disease Control and Prevention,Beijing,P.R. China.
H ZhouState Key Laboratory for Infectious Disease Prevention and Control,National Institute for Communicable Disease Control and Prevention,Chinese Center for Disease Control and Prevention,Beijing,P.R. China.
H RenState Key Laboratory for Infectious Disease Prevention and Control,National Institute for Communicable Disease Control and Prevention,Chinese Center for Disease Control and Prevention,Beijing,P.R. China.
W ShiShanghai CHROMagar Microbial Technology Center,Shanghai,P.R. China.
H JinShanghai Municipal Center for Disease Control and Prevention,Shanghai,P.R. China.
X JiangHuashan Hospital,Fudan University,Shanghai,P.R. China.
Y XuBaoshan Branch,Huashan Hospital,Fudan University,Shanghai,P.R. China.
M ZhouRuijin Hospital,Shanghai Jiao Tong University School of Medicine,Shanghai,P.R. China.
J LiRuijin Hospital,Shanghai Jiao Tong University School of Medicine,Shanghai,P.R. China.
J WangChanghai Hospital,Second Military Medical University,Shanghai,P.R. China.
Z ShaoState Key Laboratory for Infectious Disease Prevention and Control,National Institute for Communicable Disease Control and Prevention,Chinese Center for Disease Control and Prevention,Beijing,P.R. China.
X XuShanghai Municipal Center for Disease Control and Prevention,Shanghai,P.R. China.
National Institute for Communicable Disease Control and Prevention · CNCenters for Disease Control and Prevention · USFudan University · CNShanghai Jiao Tong University · CNEcologie Microbienne Lyon · FRSecond Military Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Legionnaires' disease (LD) is a globally distributed systemic infectious disease. The burden of LD in many regions is still unclear, especially in Asian countries including China. A survey of Legionella infection using real-time PCR and nested sequence-based typing (SBT) was performed in two hospitals in Shanghai, China. A total of 265 bronchoalveolar lavage fluid (BALF) specimens were collected from hospital A between January 2012 and December 2013, and 359 sputum specimens were collected from hospital B throughout 2012. A total of 71 specimens were positive for Legionella according to real-time PCR focusing on the 5S rRNA gene. Seventy of these specimens were identified as Legionella pneumophila as a result of real-time PCR amplification of the dotA gene. Results of nested SBT revealed high genetic polymorphism in these L. pneumophila and ST1 was the predominant sequence type. These data revealed that the burden of LD in China is much greater than that recognized previously, and real-time PCR may be a suitable monitoring technology for LD in large sample surveys in regions lacking the economic and technical resources to perform other methods, such as urinary antigen tests and culture methods.

Indexed as

AdultAgedBacterial InfectionsBacterial ProteinsBronchoalveolar Lavage FluidCarrier ProteinsChinaFemaleGenes, rRNAGenotypeHospitalsHumansLegionellaLegionnaires' DiseaseMaleMembrane ProteinsBacterial ProteinsCarrier ProteinsDotA protein, Legionella pneumophilaMembrane ProteinsRNA, BacterialRNA, Ribosomal, 5SBacterial infectionsclinical microbiologyinfectious diseaseLegionellaLegionnaires’ disease

Identifiers

PMID26790498
PMCPMC9150618
OpenAlexW2262249855

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.