Evidence map›Paper›PMID 26786229›Full record

ArticleVirology journal2016

Occult hepatitis B virus infection: influence of S protein variants.

Zhenhua Zhang, Ling Zhang, Yu Dai, Yafei Zhang, Jun Li, Xu Li

Abstract read
In one paragraph

Article in Virology journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

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  12. Molecular investigation of occult hepatitis B virus infection in a reference center in Northern Brazil.The Brazilian journal of infectious diseases : an official publication of the Brazilian Society of Infectious Diseases
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Zhenhua ZhangDepartment of Infectious Diseases, the First Affiliated Hospital, Anhui Medical University, Hefei, 230022, China. zzh1974cn@163.com.
Ling ZhangDepartment of Infectious Diseases, the First Affiliated Hospital, Anhui Medical University, Hefei, 230022, China. lingzhang1984@sina.com.
Yu DaiDepartment of Infectious Diseases, the First Affiliated Hospital, Anhui Medical University, Hefei, 230022, China. tina383-tt@qq.com.
Yafei ZhangDepartment of Infectious Diseases, the First Affiliated Hospital, Anhui Medical University, Hefei, 230022, China. zhangyafei198@126.com.
Jun LiSchool of Pharmacy, Anhui Medical University, Hefei, China. lijun@ahmu.edu.cn.
Xu LiDepartment of Infectious Diseases, the First Affiliated Hospital, Anhui Medical University, Hefei, 230022, China. aaylixu@qq.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIn occult hepatitis B viral infection (OBI), the persistence of hepatitis B virus (HBV) DNA is associated with a lack of hepatitis B surface antigen (HBsAg). To assess the possible role of HBsAg immune escape variants in OBI patients, variability in the HBV S gene was evaluated for OBI patients as well as chronic HBV infection patients from the same families.

methodsWe selected 17 HBV DNA-positive/HBsAg-negative patients (OBI group) and 15 HBV DNA- and HBsAg-positive patients from OBI families (control group). The S gene was amplified and cloned, and at least 15 clones per patient were sequenced and analyzed.

resultsAlthough the incidence of stop codon mutations within the S region was higher in the OBI group (13.6 %) than in the control group (1.5 %, P < 0.001), this type of mutation, together with insertion and deletion mutations, was prevalent in only three OBI patients. In the major hydrophilic region (MHR), a median of 0.75 residues were altered in every 100 residues for the OBI patients, whereas 0.95 out of 100 residues were changed in the control group (P = 0.428). Furthermore, some variants that are generally considered immune escape variants, such as mutations at positions s145, s147, and s123, were only observed in less than 5 % of all the clones sequenced, in either OBI or control group.

conclusionsOur data suggest that HBsAg variants may not play a major role in OBI pathogenesis.

Indexed as

Genetic VariationAdolescentAdultAmino Acid SubstitutionBiomarkersChildCodon, TerminatorFemaleGenotypeHepatitis BHepatitis B, ChronicHepatitis B Surface AntigensHepatitis B virusHumansMaleMiddle AgedBiomarkersCodon, TerminatorHepatitis B Surface Antigens

Identifiers

PMID26786229
PMCPMC4717550

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.