Evidence map›Paper›PMID 26786100›Full record

ArticleThe Journal of biological chemistry2016

Biophysical Characterization and Activity of Lymphostatin, a Multifunctional Virulence Factor of Attaching and Effacing Escherichia coli.

Robin L Cassady-Cain, Elizabeth A Blackburn, Husam Alsarraf, Emil Dedic, Andrew G Bease, Bettina Böttcher, René Jørgensen, Martin Wear, Mark P Stevens

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.6field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Oral exposure toFrontiers in immunology · 2023
    Article
  4. Lymphostatin, a virulence factor of attaching and effacingFrontiers in cellular and infection microbiology · 2022
    Article
  5. Article
  6. Article
  7. The Role ofToxins · 2020
    Review
  8. Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Robin L Cassady-CainFrom the Roslin Institute, Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Easter Bush, Midlothian EH25 9RG, United Kingdom.
Elizabeth A Blackburnthe Centre for Translational and Chemical Biology (CTCB), University of Edinburgh, Michael Swann Building, King's Buildings, Edinburgh EH9 3BF, United Kingdom, and.
Husam Alsarrafthe Department of Microbiology & Infection Control, Statens Serum Institut, Artillerivej 5, DK-2300 Copenhagen S, Denmark.
Emil Dedicthe Department of Microbiology & Infection Control, Statens Serum Institut, Artillerivej 5, DK-2300 Copenhagen S, Denmark.
Andrew G BeaseFrom the Roslin Institute, Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Easter Bush, Midlothian EH25 9RG, United Kingdom.
Bettina Böttcherthe Centre for Translational and Chemical Biology (CTCB), University of Edinburgh, Michael Swann Building, King's Buildings, Edinburgh EH9 3BF, United Kingdom, and.
René Jørgensenthe Department of Microbiology & Infection Control, Statens Serum Institut, Artillerivej 5, DK-2300 Copenhagen S, Denmark.
Martin Wearthe Centre for Translational and Chemical Biology (CTCB), University of Edinburgh, Michael Swann Building, King's Buildings, Edinburgh EH9 3BF, United Kingdom, and.
Mark P StevensFrom the Roslin Institute, Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Easter Bush, Midlothian EH25 9RG, United Kingdom,. Electronic address: Mark.Stevens@roslin.ed.ac.uk.
Roslin Institute · GBStatens Serum Institut · DKUniversity of Edinburgh · GB

Funding

Biotechnology and Biological Sciences Research Council BB/J004227/1Wellcome Trust 087658Wellcome Trust 101527/Z/13/Z
6 · The paper itself

Abstract

Attaching and effacing Escherichia coli cause diarrhea and typically produce lymphostatin (LifA), an inhibitor of mitogen-activated proliferation of lymphocytes and pro-inflammatory cytokine synthesis. A near-identical factor (Efa1) has been reported to mediate adherence of E. coli to epithelial cells. An amino-terminal region of LifA shares homology with the catalytic domain of the large clostridial toxins, which are retaining glycosyltransferases with a DXD motif involved in binding of a metal ion. Understanding the mode(s) of action of lymphostatin has been constrained by difficulties obtaining a stably transformed plasmid expression clone. We constructed a tightly inducible clone of enteropathogenic E. coli O127:H6 lifA for affinity purification of lymphostatin. The purified protein inhibited mitogen-activated proliferation of bovine T lymphocytes in the femtomolar range. It is a monomer in solution and the molecular envelope was determined using both transmission electron microscopy and small-angle x-ray scattering. Domain architecture was further studied by limited proteolysis. The largest proteolytic fragment containing the putative glycosyltransferase domain was tested in isolation for activity against T cells, and was not sufficient for activity. Tryptophan fluorescence studies indicated thatlymphostatin binds uridine diphosphate-N-acetylglucosamine (UDP-GlcNAc) but not UDP-glucose (UDP-Glc). Substitution of the predicted DXD glycosyltransferase motif with alanine residues abolished UDP-GlcNAc binding and lymphostatin activity, although other biophysical properties were unchanged. The data indicate that lymphostatin has UDP-sugar binding potential that is critical for activity, and is a major leap toward identifying the nature and consequences of modifications of host cell factors.

Indexed as

Amino Acid SequenceAnimalsBacterial ToxinsCattleCattle DiseasesEnteropathogenic Escherichia coliEscherichia coli InfectionsEscherichia coli ProteinsGlycosyltransferasesHumansLymphocyte ActivationModels, MolecularMolecular Sequence DataProtein Structure, TertiaryScattering, Small AngleSequence AlignmentBacterial ToxinsEscherichia coli ProteinsGlycosyltransferaseslymphostatin protein, E coliVirulence Factorscell proliferationcircular dichroism (CD)electron microscopy (EM)Escherichia coli (E. coli)glycosyltransferaseLifAlymphostatinsmall-angle X-ray scattering (SAXS)structural biologyT-cell

Identifiers

PMID26786100
PMCPMC4786716
OpenAlexW2281368702

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.