Evidence map›Paper›PMID 26785902›Full record

ArticleMalaria journal2016

Distribution of FcγR gene polymorphisms among two sympatric populations in Mali: differing allele frequencies, associations with malariometric indices and implications for genetic susceptibility to malaria.

Mariama Cherif, Daniel Amoako-Sakyi, Amagana Dolo, Jan-Olov Pearson, Ben Gyan, Dorcas Obiri-Yeboah, Issa Nebie, Sodiomon B Sirima, Ogobara Doumbo, Marita Troye-Blomberg and 1 more

Open access · goldAbstract read
In one paragraph

Article in Malaria journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 4 countries.

Mariama CherifCentre National de Recherche et de Formation sur le Paludisme, Ouagadougou, Burkina Faso. cherif.mariama@yahoo.fr.
Daniel Amoako-SakyiDepartment of Microbiology and Immunology, College of Health and Allied Sciences, School of Medical Sciences, University of Cape Coast, Cape Coast, Ghana. damoako-sakyi@ucc.edu.gh.
Amagana DoloDepartment of Epidemiology of Parasitic Diseases, Faculty of Medicine and Odonto-Stomatology, Malaria Research and Training Centre, USTTB, Bamako, Mali. adolo@icermali.org.
Jan-Olov PearsonDepartment of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University, Stockholm, Sweden. sfg@math.su.se.
Ben GyanImmunology Department, Noguchi Memorial Institute for Medical Research, University of Ghana, Legon, Accra, Ghana. BGyan@noguchi.ug.edu.gh.
Dorcas Obiri-YeboahDepartment of Microbiology and Immunology, College of Health and Allied Sciences, School of Medical Sciences, University of Cape Coast, Cape Coast, Ghana. d.obiri-yeboah@uccsms.edu.gh.
Issa NebieCentre National de Recherche et de Formation sur le Paludisme, Ouagadougou, Burkina Faso. issanebie.cnlp@fasonet.bf.
Sodiomon B SirimaCentre National de Recherche et de Formation sur le Paludisme, Ouagadougou, Burkina Faso. s.sirima.cnlp@fasonet.bf.
Ogobara DoumboDepartment of Epidemiology of Parasitic Diseases, Faculty of Medicine and Odonto-Stomatology, Malaria Research and Training Centre, USTTB, Bamako, Mali. okd@icermali.org.
Marita Troye-BlombergDepartment of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University, Stockholm, Sweden. Marita.Troye-Blomberg@su.se.
Maiga BakaryDepartment of Epidemiology of Parasitic Diseases, Faculty of Medicine and Odonto-Stomatology, Malaria Research and Training Centre, USTTB, Bamako, Mali. bmaiga@icermali.org.
Centre National de Recherche et de Formation sur le Paludisme · BFStockholm University · SEUniversity of Bamako · MLUniversity of Cape Coast · GHUniversité des Sciences, des Techniques et des Technologies de Bamako · MLUniversity of Ghana · GH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundGenetic polymorphisms in the complex gene cluster encoding human Fc-gamma receptors (FcγRs) may influence malaria susceptibility and pathogenesis. Studying genetic susceptibility to malaria is ideal among sympatric populations because the distribution of polymorphic genes among such populations can help in the identification malaria candidate genes. This study determined the distribution of three FcyRs single nucleotide polymorphisms (SNPs) (FcγRIIB-rs1050519, FcγRIIC-rs3933769 and FcγRIIIA-rs396991) among sympatric Fulani and Dogon children with uncomplicated malaria. The association of these SNPs with clinical, malariometric and immunological indices was also tested.

methodsThis study involved 242 Fulani and Dogon volunteers from Mali age under 15 years. All SNPs were genotyped with predesigned TaqMan(®) SNP Genotyping Assays. Genotypic and allelic distribution of SNPs was compared across ethnic groups using the Fisher exact test. Variations in clinical, malariometric and immunologic indices between groups were tested with Kruskal-Wallis H, Mann-Whitney U test and Fisher exact test where appropriate.

resultsThe study confirmed known malariometric and immunologic differences between sympatric Fulani and non-Fulani tribes. Parasite density was lower in the Fulani than the Dogon (p < 0.0001). The mutant allele of FcγRIIC (rs3933769) was found more frequently in the Fulani than the Dogon (p < 0.0001) while that of FcγRIIIA (rs396991) occurred less frequently in the Fulani than Dogon (p = 0.0043). The difference in the mutant allele frequency of FcγRIIB (rs1050519) between the two ethnic groups was however not statistically significant (p = 0.064). The mutant allele of rs396991 was associated with high malaria-specific IgG1 and IgG3 in the entire study population and Dogon tribe, p = 0.023 and 0.015, respectively. Parasite burden was lower in carriers of the FcγRIIC (rs3933769) mutant allele than non-carriers in the entire study population (p < 0.0001). Carriers of this allele harboured less than half the parasites found in non-carriers.

conclusionDifferences in the allelic frequencies of rs3933769 and rs396991 among Fulani and Dogon indirectly suggest that these SNPs may influence malaria susceptibility and pathogenesis in the study population. The high frequency of the FcγRIIC (rs3933769) mutant allele in the Fulani and its subsequent association with low parasite burden in the entire study population is noteworthy.

Indexed as

AdolescentChildChild, PreschoolFemaleGene FrequencyGenetic Predisposition to DiseaseGenotypeHumansInfantInfant, NewbornMalariaMaleMaliPolymorphism, Single NucleotideReceptors, IgGReceptors, IgG

Identifiers

PMID26785902
PMCPMC4717667
OpenAlexW2288097087

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.