Evidence map›Paper›PMID 26785691›Full record

ArticleBrazilian journal of medical and biological research = Revista brasileira de pesquisas medicas e biologica2016

Ropinirole alters gene expression profiles in SH-SY5Y cells: a whole genome microarray study.

M Z Zhu, W D Le, G Jin

Open access · goldAbstract read
In one paragraph

Article in Brazilian journal of medical and biological research = Revista brasileira de pesquisas medicas e biologica, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 99% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

M Z ZhuSchool of Public Health, Shanghai University of Traditional Chinese Medicine, Shanghai, China.
W D LeShanghai Institutes for Biological Sciences, Institute of Health Sciences, Chinese Academy of Science/Shanghai Jiao Tong University School of Medicine, Shanghai, China.
G JinShanghai Institutes for Biological Sciences, Institute of Health Sciences, Chinese Academy of Science/Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Shanghai Jiao Tong University · CNShanghai University of Traditional Chinese Medicine · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ropinirole (ROP) is a dopamine agonist that has been used as therapy for Parkinson's disease. In the present study, we aimed to detect whether gene expression was modulated by ROP in SH-SY5Y cells. SH-SY5Y cell lines were treated with 10 µM ROP for 2 h, after which total RNA was extracted for whole genome analysis. Gene expression profiling revealed that 113 genes were differentially expressed after ROP treatment compared with control cells. Further pathway analysis revealed modulation of the phosphatidylinositol 3-kinase (PI3K) signaling pathway, with prominent upregulation of PIK3C2B. Moreover, batches of regulated genes, including PIK3C2B, were found to be located on chromosome 1. These findings were validated by quantitative RT-PCR and Western blot analysis. Our study, therefore, revealed that ROP altered gene expression in SH-SY5Y cells, and future investigation of PIK3C2B and other loci on chromosome 1 may provide long-term implications for identifying novel target genes of Parkinson's disease.

Indexed as

Antiparkinson AgentsBlotting, WesternCell Line, TumorChromosomes, Human, Pair 1Class II Phosphatidylinositol 3-KinasesDopamine AgonistsGene ExpressionGene Expression ProfilingHumansIndolesMicroarray AnalysisNeuroblastomaOligonucleotide Array Sequence AnalysisPhosphatidylinositol 3-KinaseReal-Time Polymerase Chain ReactionSignal TransductionAntiparkinson AgentsClass II Phosphatidylinositol 3-KinasesDopamine AgonistsIndolesPhosphatidylinositol 3-KinasePIK3C2B protein, humanropinirole

Identifiers

PMID26785691
PMCPMC4725189
OpenAlexW2293619493

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.