Evidence map›Paper›PMID 26784334›Full record

ArticlePloS one2016

Exploration of Human Salivary Microbiomes--Insights into the Novel Characteristics of Microbial Community Structure in Caries and Caries-Free Subjects.

Jianye Zhou, Nan Jiang, Shaoguo Wang, Xiaopan Hu, Kangli Jiao, Xiangyi He, Zhiqiang Li, Jizeng Wang

Abstract readComparative Study
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Article
  2. Review
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  6. Article
  7. Article
  8. Article
  9. Review
  10. Metagenomic Analysis RevealsEvidence-based complementary and alternative medicine : eCAM · 2021
    Article
  11. Article
  12. The salivary microbiota in health and disease.Journal of oral microbiology · 2020
    Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Jianye ZhouCollege of Civil Engineering and Mechanics, Lanzhou University, Lanzhou, 730000, Gansu, China.
Nan JiangState Key Laboratory of Forest and Soil Ecology, Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang 110016, Liaoning, China.
Shaoguo WangSchool of Stomatology, Lanzhou University, Lanzhou 730000, Gansu, China.
Xiaopan HuKey Laboratory of Oral Diseases of Gansu Province, School of Stomatology, Northwest University for Nationalities, Lanzhou 730030, Gansu, China.
Kangli JiaoKey Laboratory of Oral Diseases of Gansu Province, School of Stomatology, Northwest University for Nationalities, Lanzhou 730030, Gansu, China.
Xiangyi HeSchool of Stomatology, Lanzhou University, Lanzhou 730000, Gansu, China.
Zhiqiang LiKey Laboratory of Oral Diseases of Gansu Province, School of Stomatology, Northwest University for Nationalities, Lanzhou 730030, Gansu, China.
Jizeng WangCollege of Civil Engineering and Mechanics, Lanzhou University, Lanzhou, 730000, Gansu, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recently, high-throughput sequencing has improved the understanding of the microbiological etiology of caries, but the characteristics of the microbial community structure in the human oral cavity with and without caries are not completely clear. To better understand these characteristics, Illumina MiSeq high-throughput sequencing was utilized to analyze 20 salivary samples (10 caries-free and 10 caries) from subjects from the same town in Dongxiang, Gansu, China. A total of 5,113 OTUs (Operational Taxonomic Units, 97% cutoff) were characterized in all of the salivary samples obtained from the 20 subjects. A comparison of the two groups revealed that (i) the predominant phyla were constant between the two groups; (ii) the relative abundance of the genera Veillonella, Bifidobacterium, Selenomonas, Olsenella, Parascardovia, Scardovia, Chryseobacterium, Terrimonas, Burkholderia and Sporobacter was significantly higher in the group with caries (P < 0.05); and (iii) four genera with low relative abundance (< 0.01% on average), including two characteristic genera in caries (Chryseobacterium and Scardovia), significantly influenced the microbial community structure at the genus and OTU levels. Moreover, via co-occurrence and principal component analyses, the co-prevalence of the pathogenic genera was detected in the caries samples, but in the caries-free samples, the function of clustered genera was more random. This result suggests that a synergistic effect may be influencing the assembly of the caries microbial community, whereas competition may play a more dominant role in governing the microbial community in the caries-free group. Our findings regarding the characteristics of the microbial communities of the groups with and without caries might improve the understanding of the microbiological etiology of caries and might improve the prevention and cure of caries in the future.

Indexed as

AdultBacteriaChinaDental CariesDNA, BacterialFemaleHigh-Throughput Nucleotide SequencingHumansMaleMicrobiotaMiddle AgedPhylogenyPrincipal Component AnalysisSalivaSequence Analysis, DNADNA, Bacterial

Identifiers

PMID26784334
PMCPMC4718657

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.