ArticleBMC genomics2016
De novo transcriptome analyses of host-fungal interactions in oil palm (Elaeis guineensis Jacq.).
Article in BMC genomics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.
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Who cites it
32 citing papers in PubMed, 104 citations in OpenAlex.
- Arabidopsis phospholipid modifications mediate cellulase-induced resistance to a fungal peptide antibiotic by imposing cell polarity.The New phytologist · 2026Article
- First pathogenomic insights into Ganoderma ellipsoideum as an emerging causal agent of basal stem rot in oil palm.Scientific reports · 2025Article
- Genomics in plant pathogen identification and control.Frontiers in plant science · 2025Review
- An In-Depth Study of PhytopathogenicJournal of fungi (Basel, Switzerland) · 2024Review
- Comprehensive analysis of causal pathogens and determinants influencing black rot disease development in MD2 pineapples.Frontiers in microbiology · 2024Article
- Induced expression of Ganoderma boninense Lanosterol 14α-Demethylase (ERG11) during interaction with oil palm.Molecular biology reports · 2023Article
- Review
- Classification of basal stem rot using deep learning: a review of digital data collection and palm disease classification methods.PeerJ. Computer science · 2023Article
- Comparative transcriptome profiling and molecular marker development for oil palm fruit color.Scientific reports · 2022Article
- Unveiling the Core Effector Proteins of Oil Palm PathogenJournal of fungi (Basel, Switzerland) · 2022Article
- Defense response changes in roots of oil palm (Elaeis guineensis Jacq.) seedlings after internal symptoms of Ganoderma boninense Pat. infection.BMC plant biology · 2022Article
- Review
- Identification of Oil Palm's Consistently Upregulated Genes during Early Infections ofPlants (Basel, Switzerland) · 2021Article
- In silico QTL mapping in an oil palm breeding program reveals a quantitative and complex genetic resistance toMolecular breeding : new strategies in plant improvement · 2021Article
- Enhanced polyethylene glycol (PEG)-mediated protoplast transformation system for the phytopathogenic fungus, Ganoderma boninense.Folia microbiologica · 2021Article
- Characterization of microRNAs from neem (3 Biotech · 2021Article
- Surviving the odds: From perception to survival of fungal phytopathogens under host-generated oxidative burst.Plant communications · 2021Review
- Transcriptional profile of oil palm pathogen, Ganoderma boninense, reveals activation of lignin degradation machinery and possible evasion of host immune response.BMC genomics · 2021Article
- EgJUB1 and EgERF113 transcription factors as potential master regulators of defense response in Elaeis guineensis against the hemibiotrophic Ganoderma boninense.BMC plant biology · 2021Article
- DecipheringJournal of fungi (Basel, Switzerland) · 2021Review
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Authors and funding
6 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundBasal stem rot (BSR) is a fungal disease in oil palm (Elaeis guineensis Jacq.) which is caused by hemibiotrophic white rot fungi belonging to the Ganoderma genus. Molecular responses of oil palm to these pathogens are not well known although this information is crucial to strategize effective measures to eradicate BSR. In order to elucidate the molecular interactions between oil palm and G. boninense and its biocontrol fungus Trichoderma harzianum, we compared the root transcriptomes of untreated oil palm seedlings with those inoculated with G. boninense and T. harzianum, respectively.
resultsDifferential gene expression analyses revealed that jasmonate (JA) and salicylate (SA) may act in an antagonistic manner in affecting the hormone biosynthesis, signaling, and downstream defense responses in G. boninense-treated oil palm roots. In addition, G. boninense may compete with the host to control disease symptom through the transcriptional regulation of ethylene (ET) biosynthesis, reactive oxygen species (ROS) production and scavenging. The strengthening of host cell walls and production of pathogenesis-related proteins as well as antifungal secondary metabolites in host plants, are among the important defense mechanisms deployed by oil palm against G. boninense. Meanwhile, endophytic T. harzianum was shown to improve the of nutrition status and nutrient transportation in host plants.
conclusionThe findings of this analysis have enhanced our understanding on the molecular interactions of G. boninense and oil palm, and also the biocontrol mechanisms involving T. harzianum, thus contributing to future formulations of better strategies for prevention and treatment of BSR.
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