Evidence map›Paper›PMID 26780407›Full record

ArticleNature chemical biology2016

Addicting diverse bacteria to a noncanonical amino acid.

Drew S Tack, Jared W Ellefson, Ross Thyer, Bo Wang, Jimmy Gollihar, Matthew T Forster, Andrew D Ellington

Abstract read
PubMed Publisher
In one paragraph

Article in Nature chemical biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 69 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Review
  6. A Methodology for the Assessment and Prioritization of Genetic Biocontainment Technologies for Engineered Microbes.Applied biosafety : journal of the American Biological Safety Association · 2024
    Article
  7. Article
  8. Article
  9. Article
  10. Selecting Better Biocatalysts by Complementing Recoded Bacteria.Angewandte Chemie (International ed. in English) · 2023
    Article
  11. Genetic Code Expansion inACS synthetic biology · 2022
    Article
  12. Review
  13. Article
  14. AddictingACS chemical biology · 2020
    Article
  15. Genetic-Code-Expansion Strategies for Vaccine Development.Chembiochem : a European journal of chemical biology · 2020
    Review
  16. Review
  17. Review
  18. Review
  19. Article
  20. Therapeutic applications of genetic code expansion.Synthetic and systems biotechnology · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Drew S TackCenter for Systems and Synthetic Biology, University of Texas at Austin, Austin, Texas, USA.
Jared W EllefsonCenter for Systems and Synthetic Biology, University of Texas at Austin, Austin, Texas, USA.
Ross ThyerCenter for Systems and Synthetic Biology, University of Texas at Austin, Austin, Texas, USA.
Bo WangCenter for Systems and Synthetic Biology, University of Texas at Austin, Austin, Texas, USA.
Jimmy GolliharCenter for Systems and Synthetic Biology, University of Texas at Austin, Austin, Texas, USA.
Matthew T ForsterCenter for Systems and Synthetic Biology, University of Texas at Austin, Austin, Texas, USA.
Andrew D EllingtonCenter for Systems and Synthetic Biology, University of Texas at Austin, Austin, Texas, USA.
The University of Texas at Austin · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Engineered orthogonal translation systems have greatly enabled the expansion of the genetic code using noncanonical amino acids (NCAAs). However, the impact of NCAAs on organismal evolution remains unclear, in part because it is difficult to force the adoption of new genetic codes in organisms. By reengineering TEM-1 β-lactamase to be dependent on a NCAA, we maintained bacterial NCAA dependence for hundreds of generations without escape.

Indexed as

Amino AcidsBacteriabeta-LactamasesBiological EvolutionCodonGram-Negative BacteriaPhenylalanineProtein EngineeringRNA, BacterialRNA, TransferTyrosineAmino Acidsbeta-Lactamasesbeta-lactamase TEM-1CodonPhenylalanineRNA, BacterialRNA, TransferTyrosine

Identifiers

PMID26780407
OpenAlexW2292169570

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.