Evidence map›Paper›PMID 26779165›Full record

ArticleFrontiers in microbiology2015

Novel Barite Chimneys at the Loki's Castle Vent Field Shed Light on Key Factors Shaping Microbial Communities and Functions in Hydrothermal Systems.

Ida H Steen, Håkon Dahle, Runar Stokke, Irene Roalkvam, Frida-Lise Daae, Hans Tore Rapp, Rolf B Pedersen, Ingunn H Thorseth

Abstract read
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Article in Frontiers in microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Ida H SteenCentre for Geobiology, University of BergenBergen, Norway; Department of Biology, University of BergenBergen, Norway.
Håkon DahleCentre for Geobiology, University of BergenBergen, Norway; Department of Biology, University of BergenBergen, Norway.
Runar StokkeCentre for Geobiology, University of BergenBergen, Norway; Department of Biology, University of BergenBergen, Norway.
Irene RoalkvamCentre for Geobiology, University of BergenBergen, Norway; Department of Biology, University of BergenBergen, Norway.
Frida-Lise DaaeCentre for Geobiology, University of BergenBergen, Norway; Department of Biology, University of BergenBergen, Norway.
Hans Tore RappCentre for Geobiology, University of BergenBergen, Norway; Department of Biology, University of BergenBergen, Norway.
Rolf B PedersenCentre for Geobiology, University of BergenBergen, Norway; Department of Earth Science, University of BergenBergen, Norway.
Ingunn H ThorsethCentre for Geobiology, University of BergenBergen, Norway; Department of Earth Science, University of BergenBergen, Norway.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In order to fully understand the cycling of elements in hydrothermal systems it is critical to understand intra-field variations in geochemical and microbiological processes in both focused, high-temperature and diffuse, low-temperature areas. To reveal important causes and effects of this variation, we performed an extensive chemical and microbiological characterization of a low-temperature venting area in the Loki's Castle Vent Field (LCVF). This area, located at the flank of the large sulfide mound, is characterized by numerous chimney-like barite (BaSO4) structures (≤ 1 m high) covered with white cotton-like microbial mats. Results from geochemical analyses, microscopy (FISH, SEM), 16S rRNA gene amplicon-sequencing and metatranscriptomics were compared to results from previous analyses of biofilms growing on black smoker chimneys at LCVF. Based on our results, we constructed a conceptual model involving the geochemistry and microbiology in the LCVF. The model suggests that CH4 and H2S are important electron donors for microorganisms in both high-temperature and low-temperature areas, whereas the utilization of H2 seems restricted to high-temperature areas. This further implies that sub-seafloor processes can affect energy-landscapes, elemental cycling, and the metabolic activity of primary producers on the seafloor. In the cotton-like microbial mats on top of the active barite chimneys, a unique network of single cells of Epsilonproteobacteria interconnected by threads of extracellular polymeric substances (EPS) was seen, differing significantly from the long filamentous Sulfurovum filaments observed in biofilms on the black smokers. This network also induced nucleation of barite crystals and is suggested to play an essential role in the formation of the microbial mats and the chimneys. Furthermore, it illustrates variations in how different genera of Epsilonproteobacteria colonize and position cells in different vent fluid mixing zones within a vent field. This may be related to niche-specific physical characteristics. Altogether, the model provides a reference for future studies and illustrates the importance of systematic comparative studies of spatially closely connected niches in order to fully understand the geomicrobiology of hydrothermal systems.

Indexed as

barite chimneychemolithoautotrophEpsilonproteobacteriahydrothermal systemsLoki's Castle Vent Fieldlow-temperature venting

Identifiers

PMID26779165
PMCPMC4703759

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