Evidence map›Paper›PMID 26779149›Full record

ArticleFrontiers in microbiology2015

Dynamics of Viral Abundance and Diversity in a Sphagnum-Dominated Peatland: Temporal Fluctuations Prevail Over Habitat.

Flore Ballaud, Alexis Dufresne, André-Jean Francez, Jonathan Colombet, Télesphore Sime-Ngando, Achim Quaiser

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Diversity of Active Viral Infections within the Sphagnum Microbiome.Applied and environmental microbiology · 2018
    Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Flore BallaudUMR CNRS 6553 ECOBIO, Université de Rennes 1 Rennes, France.
Alexis DufresneUMR CNRS 6553 ECOBIO, Université de Rennes 1 Rennes, France.
André-Jean FrancezUMR CNRS 6553 ECOBIO, Université de Rennes 1 Rennes, France.
Jonathan ColombetUniversité Clermont Auvergne, Université Blaise PascalClermont-Ferrand, France; CNRS, UMR 6023, Laboratoire Microorganismes: Génome et EnvironnementAubière, France.
Télesphore Sime-NgandoUniversité Clermont Auvergne, Université Blaise PascalClermont-Ferrand, France; CNRS, UMR 6023, Laboratoire Microorganismes: Génome et EnvironnementAubière, France.
Achim QuaiserUMR CNRS 6553 ECOBIO, Université de Rennes 1 Rennes, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Viruses impact microbial activity and carbon cycling in various environments, but their diversity and ecological importance in Sphagnum-peatlands are unknown. Abundances of viral particles and prokaryotes were monitored bi-monthly at a fen and a bog at two different layers of the peat surface. Viral particle abundance ranged from 1.7 x 10(6) to 5.6 x 10(8) particles mL(-1), and did not differ between fen and bog but showed seasonal fluctuations. These fluctuations were positively correlated with prokaryote abundance and dissolved organic carbon, and negatively correlated with water-table height and dissolved oxygen. Using shotgun metagenomics we observed a shift in viral diversity between winter/spring and summer/autumn, indicating a seasonal succession of viral communities, mainly driven by weather-related environmental changes. Based on the seasonal asynchrony between viral and microbial diversity, we hypothesize a seasonal shift in the active microbial communities associated with a shift from lysogenic to lytic lifestyles. Our results suggest that temporal variations of environmental conditions rather than current habitat differences control the dynamics of virus-host interactions in Sphagnum-dominated peatlands.

Indexed as

bogecological successionfenmetaviromesmicrobial interactionsprokaryotes

Identifiers

PMID26779149
PMCPMC4701944

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.